Evidence map›Paper›PMID 27089319›Full record

ArticleInternational journal of molecular sciences2016

The Molecular Epidemiology and Evolutionary Dynamics of Influenza B Virus in Two Italian Regions during 2010-2015: The Experience of Sicily and Liguria.

Fabio Tramuto, Andrea Orsi, Carmelo Massimo Maida, Claudio Costantino, Cecilia Trucchi, Cristiano Alicino, Francesco Vitale, Filippo Ansaldi

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Surveillance Data for Eight Consecutive Influenza Seasons in Sicily, Italy.The American journal of tropical medicine and hygiene · 2019
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Influenza B viruses in pigs, Taiwan.Influenza and other respiratory viruses · 2019
    Article
  11. Article
  12. Article
  13. Antigenic and genetic characterization of influenza viruses circulating in Bulgaria during the 2015/2016 season.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2017
    Article
  14. Article
  15. Infectious Diseases: Pathophysiology, Diagnostics and Prevention.International journal of molecular sciences · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Fabio TramutoDepartment of Health Promotion Sciences and Mother-Child Care "G. D'Alessandro"-Hygiene Section, University of Palermo, Palermo 90127, Italy. fabio.tramuto@unipa.it.
Andrea OrsiDepartment of Health Sciences, University of Genoa, Genoa 16132, Italy. andrea.orsi@unige.it.
Carmelo Massimo MaidaDepartment of Health Promotion Sciences and Mother-Child Care "G. D'Alessandro"-Hygiene Section, University of Palermo, Palermo 90127, Italy. carmelo.maida@unipa.it.
Claudio CostantinoDepartment of Health Promotion Sciences and Mother-Child Care "G. D'Alessandro"-Hygiene Section, University of Palermo, Palermo 90127, Italy. claudio.costantino01@unipa.it.
Cecilia TrucchiDepartment of Health Sciences, University of Genoa, Genoa 16132, Italy. cecilia.trucchi@edu.unige.it.
Cristiano AlicinoDepartment of Health Sciences, University of Genoa, Genoa 16132, Italy. cristiano.alicino@unige.it.
Francesco VitaleDepartment of Health Promotion Sciences and Mother-Child Care "G. D'Alessandro"-Hygiene Section, University of Palermo, Palermo 90127, Italy. francesco.vitale@unipa.it.
Filippo AnsaldiDepartment of Health Sciences, University of Genoa, Genoa 16132, Italy. filippo.ansaldi@unige.it.
Azienda Ospedaliera Universitaria Policlinico "Paolo Giaccone" di Palermo · ITOspedale Policlinico San Martino · ITUniversity of Genoa · ITUniversity of Palermo · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Molecular epidemiology of influenza B virus remained poorly studied in Italy, despite representing a major contributor to seasonal epidemics. This study aimed to reconstruct the phylogenetic relationships and genetic diversity of the hemagglutinin gene sequences of 197 influenza B strains circulating in both Southern (Sicily) and Northern (Liguria) Italy between 2010 and 2015. Upper respiratory tract specimens of patients displaying symptoms of influenza-like illness were screened by real-time RT-PCR assay for the presence of influenza B virus. PCR-positive influenza B samples were further analyzed by sequencing. Neighbor-joining phylogenetic trees were constructed and the amino-acid alignments were analyzed. Phylogenetic analysis showed clusters in B/Victoria clade 1A/1B (n = 29, 14.7%), and B/Yamagata clades 2 (n = 112, 56.8%) and 3 (n = 56, 28.4%). Both influenza B lineages were found to co-circulate during the study period, although a lineage swap from B/Victoria to B/Yamagata occurred in Italy between January 2011 and January 2013. The most represented amino-acid substitutions were N116K in the 120-loop (83.9% of B/Yamagata clade 3 strains) and I146V in the 150-loop (89.6% of B/Victoria clade 1 strains). D197N in 190-helix was found in almost all viruses collected. Our findings provide further evidence to support the adoption of quadrivalent influenza vaccines in our country.

Indexed as

PhylogenyBiological EvolutionGenetic VariationHemagglutinin Glycoproteins, Influenza VirusHumansInfluenza B virusInfluenza, HumanItalyMolecular EpidemiologySicilyHemagglutinin Glycoproteins, Influenza Virusinfluenza Binfluenza-like illnessItalyLigurialineagesmolecular epidemiologySicilysurveillanceviral evolution

Identifiers

PMID27089319
PMCPMC4849005
OpenAlexW2338760800

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.