Evidence map›Paper›PMID 27089222›Full record

ArticleMedicine and science in sports and exercise2016

Objective Assessment of Physical Activity: Classifiers for Public Health.

Jacqueline Kerr, Ruth E Patterson, Katherine Ellis, Suneeta Godbole, Eileen Johnson, Gert Lanckriet, John Staudenmayer

Registry-linked trialAbstract read
In one paragraph

Article in Medicine and science in sports and exercise, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT01775826 (Validating Machine -Learned Classifiers of Sedentary Behavior and Physical Activity), which is not on this map. Cited by 36 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT01775826 nacompletednot on this map

Validating Machine -Learned Classifiers of Sedentary Behavior and Physical Activity

TypeinterventionalSponsorUniversity of California, San DiegoRan2013 to 2016Enrolled225ConditionsPhysical Activity, Sedentary LifestyleArmsMeasurement
3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Bicycle Trains, Cycling, and Physical Activity: A Pilot Cluster RCT.American journal of preventive medicine · 2017
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  15. The Relationship of Accelerometer-Assessed Standing Time With and Without Ambulation and Mortality: The WHI OPACH Study.The journals of gerontology. Series A, Biological sciences and medical sciences · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jacqueline Kerr1Department of Family Medicine and Public Health, University of California, San Diego, CA; 2Department of Computer Science and Engineering, University of California, San Diego, CA; and 3University of Massachusetts, Amherst, MA.
Ruth E Patterson
Katherine Ellis
Suneeta Godbole
Eileen Johnson
Gert Lanckriet
John Staudenmayer

Funding

UCSD Biorepository Shared ResourceU54CA155435 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI OLEFSKY, JERROLD MICHAEL · 2011 to 2015
$9.1M
A Tool for Geospatial Analysis of Physical ActivityU01CA130771 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI PATRICK, KEVIN · 2007 to 2010
$2.9M
Validating Machine-Learned Classifiers of Sedentary Behavior and Physical ActivitR01CA164993 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KERR, JACQUELINE · 2012 to 2015
$2.2M
NCI NIH HHS R01 CA164993NCI NIH HHS R01CA164993NCI NIH HHS U01 CA130771NCI NIH HHS U01CA130771NCI NIH HHS U54 CA155435NCI NIH HHS U54CA155435
6 · The paper itself

Abstract

purposeWalking for health is recommended by health agencies, partly based on epidemiological studies of self-reported behaviors. Accelerometers are now replacing survey data, but it is not clear that intensity-based cut points reflect the behaviors previously reported. New computational techniques can help classify raw accelerometer data into behaviors meaningful for public health.

methodsFive hundred twenty days of triaxial 30-Hz accelerometer data from three studies (n = 78) were employed as training data. Study 1 included prescribed activities completed in natural settings. The other two studies included multiple days of free-living data with SenseCam-annotated ground truth. The two populations in the free-living data sets were demographically and physical different. Random forest classifiers were trained on each data set, and the classification accuracy on the training data set and that applied to the other available data sets were assessed. Accelerometer cut points were also compared with the ground truth from the three data sets.

resultsThe random forest classified all behaviors with over 80% accuracy. Classifiers developed on the prescribed data performed with higher accuracy than the free-living data classifier, but these did not perform as well on the free-living data sets. Many of the observed behaviors occurred at different intensities compared with those identified by existing cut points.

conclusionsNew machine learning classifiers developed from prescribed activities (study 1) were considerably less accurate when applied to free-living populations or to a functionally different population (studies 2 and 3). These classifiers, developed on free-living data, may have value when applied to large cohort studies with existing hip accelerometer data.

Indexed as

AlgorithmsExerciseMachine LearningAccelerometryActivities of Daily LivingAdultAgedBicyclingFemaleHumansMaleMiddle AgedMonitoring, AmbulatoryObesityOverweightPublic Health

Identifiers

PMID27089222
PMCPMC4837464

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.