Evidence map›Paper›PMID 27088252›Full record

ArticleNature communications2016

Structure of eukaryotic purine/H(+) symporter UapA suggests a role for homodimerization in transport activity.

Yilmaz Alguel, Sotiris Amillis, James Leung, George Lambrinidis, Stefano Capaldi, Nicola J Scull, Gregory Craven, So Iwata, Alan Armstrong, Emmanuel Mikros and 3 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed
13.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed, 123 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
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  5. Article
  6. Article
  7. Article
  8. Article
  9. SLC26 Anion Transporters.Handbook of experimental pharmacology · 2024
    Review
  10. Article
  11. Article
  12. Purine metabolism in plant pathogenic fungi.Frontiers in microbiology · 2024
    Review
  13. Insight into the mechanism of HProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 4 countries.

Yilmaz AlguelDepartment of Life Sciences, Imperial College London, London SW7 2AZ, UK.
Sotiris AmillisFaculty of Biology, University of Athens, Panepistimioupolis, 15781, Athens, Greece.
James LeungDepartment of Life Sciences, Imperial College London, London SW7 2AZ, UK.
George LambrinidisFaculty of Pharmacy, University of Athens, Panepistimioupolis, 15771 Athens, Greece.
Stefano CapaldiDepartment of Life Sciences, Imperial College London, London SW7 2AZ, UK.ORCID http://orcid.org/0000-0003-4632-8100
Nicola J ScullDepartment of Life Sciences, Imperial College London, London SW7 2AZ, UK.
Gregory CravenDepartment of Chemistry, Imperial College London, London SW7 2AZ, UK.
So IwataDepartment of Life Sciences, Imperial College London, London SW7 2AZ, UK.
Alan ArmstrongDepartment of Chemistry, Imperial College London, London SW7 2AZ, UK.
Emmanuel MikrosFaculty of Pharmacy, University of Athens, Panepistimioupolis, 15771 Athens, Greece.
George DiallinasFaculty of Biology, University of Athens, Panepistimioupolis, 15781, Athens, Greece.
Alexander D CameronSchool of Life Sciences, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, UK.
Bernadette ByrneDepartment of Life Sciences, Imperial College London, London SW7 2AZ, UK.ORCID http://orcid.org/0000-0001-9598-9832
Imperial College London · GBNational and Kapodistrian University of Athens · GRKyoto University · JPUniversity of Verona · ITUniversity of Warwick · GB

Funding

Biotechnology and Biological Sciences Research Council BB/K017292/1
6 · The paper itself

Abstract

The uric acid/xanthine H(+) symporter, UapA, is a high-affinity purine transporter from the filamentous fungus Aspergillus nidulans. Here we present the crystal structure of a genetically stabilized version of UapA (UapA-G411VΔ1-11) in complex with xanthine. UapA is formed from two domains, a core domain and a gate domain, similar to the previously solved uracil transporter UraA, which belongs to the same family. The structure shows UapA in an inward-facing conformation with xanthine bound to residues in the core domain. Unlike UraA, which was observed to be a monomer, UapA forms a dimer in the crystals with dimer interactions formed exclusively through the gate domain. Analysis of dominant negative mutants is consistent with dimerization playing a key role in transport. We postulate that UapA uses an elevator transport mechanism likely to be shared with other structurally homologous transporters including anion exchangers and prestin.

Indexed as

ProtonsAspergillus nidulansBiological TransportCrystallography, X-RayFungal ProteinsGene ExpressionKineticsMembrane Transport ProteinsModels, MolecularMutationProtein MultimerizationProtein Structure, SecondaryProtein Structure, TertiaryRecombinant ProteinsSaccharomyces cerevisiaeSubstrate SpecificityFungal ProteinsMembrane Transport ProteinsProtonsRecombinant ProteinsUAPA protein, Aspergillus nidulansXanthine

Identifiers

PMID27088252
PMCPMC4837479
OpenAlexW2339377433

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.