Evidence map›Paper›PMID 27087920›Full record

ArticleEcology and evolution2016

Decoupled genomic elements and the evolution of partner quality in nitrogen-fixing rhizobia.

Benjamin R Gordon, Christie R Klinger, Dylan J Weese, Jennifer A Lau, Patricia V Burke, Bryn T M Dentinger, Katy D Heath

Open access · goldAbstract read
In one paragraph

Article in Ecology and evolution, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
4.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Legume-imposed selection for more-efficient symbiotic rhizobia.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  5. The diversity and evolution of microbial dissimilatory phosphite oxidation.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  6. Article
  7. Article
  8. Symbiont switching and alternative resource acquisition strategies drive mutualism breakdown.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 2 countries.

Benjamin R GordonDepartment of Plant Biology University of Illinois Urbana-Champaign 505 S. Goodwin Ave. Urbana Illinois 61801.
Christie R KlingerDepartment of Plant Biology University of Illinois Urbana-Champaign 505 S. Goodwin Ave. Urbana Illinois 61801.
Dylan J WeeseDepartment of Biology St. Ambrose University 518 West Locust St Davenport Iowa 52803.
Jennifer A LauKellogg Biological Station and Department of Plant Biology Michigan State University 3700 E. Gull Lake Drive Hickory Corners Michigan 49060.
Patricia V BurkeDepartment of Plant Biology University of Illinois Urbana-Champaign 505 S. Goodwin Ave. Urbana Illinois 61801.
Bryn T M DentingerJodrell Laboratory Royal Botanic Gardens Kew Richmond Surrey TW9 3DS United Kingdom.
Katy D HeathDepartment of Plant Biology University of Illinois Urbana-Champaign 505 S. Goodwin Ave. Urbana Illinois 61801.
Department of Plant Biology · USGoodwin College · USMichigan State University · USRoyal Botanic Gardens, Kew · GBSaint Ambrose University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Understanding how mutualisms evolve in response to a changing environment will be critical for predicting the long-term impacts of global changes, such as increased N (nitrogen) deposition. Bacterial mutualists in particular might evolve quickly, thanks to short generation times and the potential for independent evolution of plasmids through recombination and/or HGT (horizontal gene transfer). In a previous work using the legume/rhizobia mutualism, we demonstrated that long-term nitrogen fertilization caused the evolution of less-mutualistic rhizobia. Here, we use our 63 previously isolated rhizobium strains in comparative phylogenetic and quantitative genetic analyses to determine the degree to which variation in partner quality is attributable to phylogenetic relationships among strains versus recent genetic changes in response to N fertilization. We find evidence of distinct evolutionary relationships between chromosomal and pSym genes, and broad similarity between pSym genes. We also find that nifD has a unique evolutionary history that explains much of the variation in partner quality, and suggest MoFe subunit interaction sites in the evolution of less-mutualistic rhizobia. These results provide insight into the mechanisms behind the evolutionary response of rhizobia to long-term N fertilization, and we discuss the implications of our results for the evolution of the mutualism.

Indexed as

Cheatingmutualismnitrogen depositionpartner qualityRhizobiumsymbiosis

Identifiers

PMID27087920
PMCPMC4775534
OpenAlexW2320041405

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.