Evidence map›Paper›PMID 27087054›Full record

ArticleJournal of clinical laboratory analysis2016

Impact of FokI (rs10735810) and BsmI (rs1544410) on Treatment of Chronic HCV Patients With Genotype 4.

Olfat Shaker, Yasser Nassar, Shymaa Ayoub, Maissa Elrazki, Amr Zahra

Open access · bronzeAbstract read
In one paragraph

Article in Journal of clinical laboratory analysis, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Olfat ShakerDepartment of Medical Biochemistry and Molecular Biology, Faculty of Medicine, Cairo University, Giza, Egypt. olfatshaker@yahoo.com.
Yasser NassarDepartment of Medical Biochemistry and Molecular Biology, Faculty of Medicine, Cairo University, Giza, Egypt.
Shymaa AyoubDepartment of Biochemistry, Fayoum University, Al Fayoum, Egypt.
Maissa ElrazkiDepartment of Tropical Medicine, Faculty of Medicine, Cairo University, Giza, Egypt.
Amr ZahraDepartment of Biochemistry, Fayoum University, Al Fayoum, Egypt.
Cairo University · EGFayoum University · EG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND AND

aimChronic infection with hepatitis C virus (HCV) is a huge problem both globally and at the level of the individual patient. Our aim is to detect the influence of vitamin D receptor gene polymorphisms (BsmI and Fok1) and vitamin D level in HCV patients under treatment with interferon. SUBJECT AND

methodsBlood samples were taken from 103 HCV patients all of them are genotype 4. They were divided into responders (n = 63) and nonresponders (n = 40) according to their response to interferon treatment. Also 120 subjects with matched age and sex were enrolled as controls. All subjects were subjected to history taking, general examination, liver function tests, hepatitis markers, HCV quantitation by real-time polymerase chain reaction (PCR), DNA extraction from whole blood, PCR-restriction fragment length polymorphism (RFLP) for genotyping, and quantitation of vitamin D level by ELISA.

resultsThere were significant differences between responders and nonresponders in the mean values of vitamin D (P = 0.001) as well as the prevalence of single nucleotide polymorphism (SNP) BsmI (Bb) (P = 0.02). Meanwhile, no significant differences in Fok1 genotype between responders and nonresponders to interferon therapy of HCV patients in all genotypes [FF, Ff, ff) (P = 0.34, 0.091, and 0.43), respectively.

conclusionBsmI and vitamin D level in chronic liver disease patients are predictors of response to combination therapy of HCV.

Indexed as

Pharmacogenomic TestingAdultAntiviral AgentsDNA Mutational AnalysisFemaleGenotypeHepacivirusHepatitis C, ChronicHumansInterferonsMaleMiddle AgedPolymorphism, Single NucleotideReceptors, CalcitriolVitamin DAntiviral AgentsInterferonsReceptors, CalcitriolVitamin Dhepatitis Cpolymorphismvitamin D

Identifiers

PMID27087054
PMCPMC6807094
OpenAlexW2336959872

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.