Evidence map›Paper›PMID 27081520›Full record

ArticleHuman genome variation2015

DGCR6 at the proximal part of the DiGeorge critical region is involved in conotruncal heart defects.

Wenming Gao, Takashi Higaki, Minenori Eguchi-Ishimae, Hidehiko Iwabuki, Zhouying Wu, Eiichi Yamamoto, Hidemi Takata, Masaaki Ohta, Issei Imoto, Eiichi Ishii and 1 more

Open access · goldAbstract read
In one paragraph

Article in Human genome variation, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 25 citations in OpenAlex.

  1. Trial
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  3. Observational
  4. The dynamics of tubulogenesis in development and disease.Development (Cambridge, England) · 2025
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  9. Interstitial 20p13 microdeletion includingClinical case reports · 2021
    Article
  10. Article
  11. Article
  12. Molecular diagnosis of an infant withHuman genome variation · 2020
    Article
  13. Review
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Wenming GaoDepartment of Pediatrics, Ehime University Graduate School of Medicine , Toon, Ehime, Japan.
Takashi HigakiDepartment of Pediatrics, Ehime University Graduate School of Medicine , Toon, Ehime, Japan.
Minenori Eguchi-IshimaeDepartment of Pediatrics, Ehime University Graduate School of Medicine , Toon, Ehime, Japan.
Hidehiko IwabukiDepartment of Pediatrics, Ehime University Graduate School of Medicine , Toon, Ehime, Japan.
Zhouying WuDepartment of Pediatrics, Ehime University Graduate School of Medicine , Toon, Ehime, Japan.
Eiichi YamamotoDepartment of Pediatrics, Ehime prefecture central hospital , Matsuyama, Japan.
Hidemi TakataDepartment of Pediatrics, Ehime University Graduate School of Medicine , Toon, Ehime, Japan.
Masaaki OhtaDepartment of Pediatrics, Ehime University Graduate School of Medicine , Toon, Ehime, Japan.
Issei ImotoDepartment of Human Genetics, Institute of Health Biosciences, The University of Tokushima Graduate School , Tokushima, Japan.
Eiichi IshiiDepartment of Pediatrics, Ehime University Graduate School of Medicine , Toon, Ehime, Japan.
Mariko EguchiDepartment of Pediatrics, Ehime University Graduate School of Medicine , Toon, Ehime, Japan.
Ehime University · JPEhime Prefectural Central Hospital · JPTokushima University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cardiac anomaly is one of the hallmarks of DiGeorge syndrome (DGS), observed in approximately 80% of patients. It often shows a characteristic morphology, termed as conotruncal heart defects. In many cases showing only the conotruncal heart defect, deletion of 22q11.2 region cannot be detected by fluorescence in situ hybridization (FISH), which is used to detect deletion in DGS. We investigated the presence of genomic aberrations in six patients with congenital conotruncal heart defects, who show no deletion at 22q11.2 in an initial screening by FISH. In these patients, no abnormalities were identified in the coding region of the TBX1 gene, one of the key genes responsible for the phenotype of DGS. However, when copy number alteration was analyzed by high-resolution array analysis, a small deletion or duplication in the proximal end of DiGeorge critical region was detected in two patients. The affected region contains the DGCR6 and PRODH genes. DGCR6 has been reported to affect the expression of the TBX1 gene. Our results suggest that altered dosage of gene(s) other than TBX1, possibly DGCR6, may also be responsible for the development of conotruncal heart defects observed in patients with DGS and, in particular, in those with stand-alone conotruncal heart defects.

Identifiers

PMID27081520
PMCPMC4785558
OpenAlexW2326725280

What OpenQuestion holds

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LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.