Evidence map›Paper›PMID 27081299›Full record

ArticleIEEE Nuclear Science Symposium conference record. Nuclear Science Symposium2014

Handling Big Data in Medical Imaging: Iterative Reconstruction with Large-Scale Automated Parallel Computation.

Jae H Lee, Yushu Yao, Uttam Shrestha, Grant T Gullberg, Youngho Seo

Abstract read
In one paragraph

Article in IEEE Nuclear Science Symposium conference record. Nuclear Science Symposium, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jae H LeeUniversity of North Carolina, Chapel Hill, NC 27599 USA.
Yushu YaoNational Energy Research Scientific Computing (NERSC) Center, Berkeley, CA 94704 USA.
Uttam ShresthaPhysics Research Laboratory, Department of Radiology and Biomedical Imaging, University of California, San Francisco, CA 94143 USA.
Grant T GullbergStructural Biology and Imaging Department, Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94704 USA.
Youngho SeoPhysics Research Laboratory, Department of Radiology and Biomedical Imaging, University of California, San Francisco, CA 94143 USA.

Funding

DYNAMIC CARDIAC SPECT IMAGINGR01HL050663 · NHLBI · UNIVERSITY OF UTAH · PI GULLBERG, GRANT T · 1995 to 2014
$7.0M
Energy-Independent Single Photon Molecular Imaging TechnologyR01EB012965 · NIBIB · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CUI, YONGGANG, SEO, YOUNGHO · 2011 to 2014
$2.2M
NHLBI NIH HHS R01 HL050663NIBIB NIH HHS R01 EB012965
6 · The paper itself

Abstract

The primary goal of this project is to implement the iterative statistical image reconstruction algorithm, in this case maximum likelihood expectation maximum (MLEM) used for dynamic cardiac single photon emission computed tomography, on Spark/GraphX. This involves porting the algorithm to run on large-scale parallel computing systems. Spark is an easy-to- program software platform that can handle large amounts of data in parallel. GraphX is a graph analytic system running on top of Spark to handle graph and sparse linear algebra operations in parallel. The main advantage of implementing MLEM algorithm in Spark/GraphX is that it allows users to parallelize such computation without any expertise in parallel computing or prior knowledge in computer science. In this paper we demonstrate a successful implementation of MLEM in Spark/GraphX and present the performance gains with the goal to eventually make it useable in clinical setting.

Identifiers

PMID27081299
PMCPMC4829376

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.