Evidence map›Paper›PMID 27077383›Full record

ArticlePloS one2016

The Use of Kosher Phenotyping for Mapping QTL Affecting Susceptibility to Bovine Respiratory Disease.

Ehud Lipkin, Maria Giuseppina Strillacci, Harel Eitam, Moran Yishay, Fausta Schiavini, Morris Soller, Alessandro Bagnato, Ariel Shabtay

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 31 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Ehud LipkinDepartment of Genetics, Hebrew University of Jerusalem, Jerusalem, Israel.ORCID http://orcid.org/0000-0003-2624-6765
Maria Giuseppina StrillacciUniversità degli Studi di Milano (UNIMI), Milan, Italy.ORCID http://orcid.org/0000-0002-8972-1730
Harel EitamDepartment of Ruminant Sciences, Agricultural Research Organization (ARO), Bet-Dagan, Israel.
Moran YishayDepartment of Ruminant Sciences, Agricultural Research Organization (ARO), Bet-Dagan, Israel.
Fausta SchiaviniUniversità degli Studi di Milano (UNIMI), Milan, Italy.
Morris SollerDepartment of Genetics, Hebrew University of Jerusalem, Jerusalem, Israel.
Alessandro BagnatoUniversità degli Studi di Milano (UNIMI), Milan, Italy.
Ariel ShabtayDepartment of Ruminant Sciences, Agricultural Research Organization (ARO), Bet-Dagan, Israel.
Agricultural Research Organization · ILUniversity of Milan · ITHebrew University of Jerusalem · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bovine respiratory disease (BRD) is the leading cause of morbidity and mortality in feedlot cattle, caused by multiple pathogens that become more virulent in response to stress. As clinical signs often go undetected and various preventive strategies failed, identification of genes affecting BRD is essential for selection for resistance. Selective DNA pooling (SDP) was applied in a genome wide association study (GWAS) to map BRD QTLs in Israeli Holstein male calves. Kosher scoring of lung adhesions was used to allocate 122 and 62 animals to High (Glatt Kosher) and Low (Non-Kosher) resistant groups, respectively. Genotyping was performed using the Illumina BovineHD BeadChip according to the Infinium protocol. Moving average of -logP was used to map QTLs and Log drop was used to define their boundaries (QTLRs). The combined procedure was efficient for high resolution mapping. Nineteen QTLRs distributed over 13 autosomes were found, some overlapping previous studies. The QTLRs contain polymorphic functional and expression candidate genes to affect kosher status, with putative immunological and wound healing activities. Kosher phenotyping was shown to be a reliable means to map QTLs affecting BRD morbidity.

Indexed as

Chromosome MappingPhenotypeAnimalsCattleCattle DiseasesDisease ResistanceGenetic Predisposition to DiseaseMaleQuantitative Trait LociRespiratory Tract Diseases

Identifiers

PMID27077383
PMCPMC4831767
OpenAlexW2339521697

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.