Evidence map›Paper›PMID 27076666›Full record

ArticleJournal of clinical microbiology2016

Novel Taxa Associated with Human Fungal Black-Grain Mycetomas: Emarellia grisea gen. nov., sp. nov., and Emarellia paragrisea sp. nov.

Andrew M Borman, Marie Desnos-Ollivier, Colin K Campbell, Paul D Bridge, Eric Dannaoui, Elizabeth M Johnson

Open access · bronzeAbstract read
In one paragraph

Article in Journal of clinical microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed, 1 pooled it
10.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 1 synthesis or guideline pooled it, 45 citations in OpenAlex.

  1. Name Changes for Fungi of Medical Importance, 2016-2017.Journal of clinical microbiology · 2019
    Pooled it
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  9. The first three reported cases ofMedical mycology case reports · 2023
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  10. Diagnostics to support mycetoma management-Development of two target product profiles.Tropical medicine & international health : TM & IH · 2022
    Article
  11. Article
  12. A case of cutaneous phaeohyphomycosis caused byMedical mycology case reports · 2021
    Article
  13. In vitro susceptibility testing for black grain eumycetoma causative agents.Transactions of the Royal Society of Tropical Medicine and Hygiene · 2021
    Article
  14. Article
  15. The global distribution of actinomycetoma and eumycetoma.PLoS neglected tropical diseases · 2020
    Review
  16. Article
  17. CoelomycetousStudies in mycology · 2018
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Andrew M BormanPHE Mycology Reference Laboratory, Bristol, United Kingdom Andy.Borman@uhBristol.nhs.uk.
Marie Desnos-OllivierInstitut Pasteur, National Reference Centre for Invasive Mycosis and Antifungals, Molecular Mycology Unit, CNRS URA3012, Paris, France.
Colin K CampbellPHE Mycology Reference Laboratory, Bristol, United Kingdom.
Paul D BridgeCABI Europe-UK, Egham, Surrey, United Kingdom.
Eric DannaouiInstitut Pasteur, National Reference Centre for Invasive Mycosis and Antifungals, Molecular Mycology Unit, CNRS URA3012, Paris, France.
Elizabeth M JohnsonPHE Mycology Reference Laboratory, Bristol, United Kingdom.
Institut Pasteur · FRCAB International · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Eumycetoma is a debilitating, chronic, fungal infection that is endemic in India, Indonesia, and parts of Africa and South and Central America. It remains a neglected tropical disease in need of international recognition. Infections follow traumatic implantation of saprophytic fungi and frequently require radical surgery or amputation in the absence of appropriate treatment. Several fungal species can cause black-grain mycetomas, including Madurella spp. (Sordariales), Falciformispora spp., Trematosphaeria grisea, Biatriospora mackinnonii, Pseudochaetosphaeronema larense, and Medicopsis romeroi (all Pleosporales). We performed phylogenetic analyses based on five loci on 31 isolates from two international culture collections to establish the taxonomic affiliations of fungi that had been isolated from cases of black-grain mycetoma and historically classified as Madurella grisea Although most strains were well resolved to species level and corresponded to known agents of eumycetoma, six independent isolates, which failed to produce conidia under any conditions tested, were only distantly related to existing members of the Pleosporales Five of the six isolates shared >99% identity with each other and are described as Emarellia grisea gen. nov. and sp. nov; the sixth isolate represents a sister species in this novel genus and is described as Emarellia paragrisea. Several E. grisea isolates were present in both United Kingdom and French culture collections and had been isolated independently over 6 decades from cases of imported eumycetoma. Four of the six isolates involved patients that had originated on the Indian subcontinent. All isolates were all susceptible in vitro to the azole antifungals, but had elevated MICs with caspofungin.

Indexed as

PhylogenyAntifungal AgentsAzolesFungiHumansMicrobial Sensitivity TestsMycetomaAntifungal AgentsAzoles

Identifiers

PMID27076666
PMCPMC4922095
OpenAlexW2342170200

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.