Evidence map›Paper›PMID 27076662›Full record

ArticleJournal of clinical microbiology2016

Endpoint Quaking-Induced Conversion: a Sensitive, Specific, and High-Throughput Method for Antemortem Diagnosis of Creutzfeldt-Jacob Disease.

Keding Cheng, Robert Vendramelli, Angela Sloan, Brooks Waitt, Lisa Podhorodecki, Debra Godal, J David Knox

Abstract readEvaluation Study
In one paragraph

Article in Journal of clinical microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Keding ChengNational Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, Manitoba, Canada keding.cheng@phac-aspc.gc.ca david.knox@phac-aspc.gc.ca.
Robert VendramelliNational Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, Manitoba, Canada.
Angela SloanNational Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, Manitoba, Canada.
Brooks WaittNational Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, Manitoba, Canada.
Lisa PodhorodeckiNational Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, Manitoba, Canada.
Debra GodalNational Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, Manitoba, Canada.
J David KnoxNational Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, Manitoba, Canada keding.cheng@phac-aspc.gc.ca david.knox@phac-aspc.gc.ca.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Prion Laboratory Section of the Public Health Agency of Canada supports heath care professionals dealing with patients suspected to have Creutzfeldt-Jakob disease (CJD) by testing cerebrospinal fluid (CSF) for protein markers of CJD. To better serve Canadian diagnostic requirements, a quaking-induced conversion (QuIC)-based assay has been added to the test panel. The QuIC tests exploit the ability of disease-associated prion protein, found in the CSF of a majority of CJD patients, to convert a recombinant prion protein (rPrP) into detectable amounts of a misfolded, aggregated form of rPrP. The rPrP aggregates interact with a specific dye, causing a measurable change in the dye's fluorescence emission spectrum. Optimal test and analysis parameters were empirically determined. Taking both practical and performance considerations into account, an endpoint QuIC (EP-QuIC) configuration was chosen. EP-QuIC uses a thermo-mixer to perform the shaking necessary to produce the quaking-induced conversions. Fluorescence readings are obtained from a microwell fluorescence reader only at the beginning and the end of EP-QuIC reactions. Samples for which the relative fluorescence unit ratio between the initial and final readings represent a ≥4 increase in signal intensity in at least two of the three replicates are classified as positive. A retrospective analysis of 91 CSF samples that included 45 confirmed cases of CJD and 46 non-CJD cases was used to estimate the performance characteristics of the EP-QuIC assay. The diagnostic sensitivity and specificity of the EP-QuIC test of this set of samples were 98 and 91%, respectively.

Indexed as

DiagnosisCanadaCerebrospinal FluidCreutzfeldt-Jakob SyndromeDiagnostic Tests, RoutineHumansPrion ProteinsRetrospective StudiesSensitivity and SpecificityPrion Proteins

Identifiers

PMID27076662
PMCPMC4922112

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.