Evidence map›Paper›PMID 27076642›Full record

ArticleJournal of virology2016

Roles of Capsid-Interacting Host Factors in Multimodal Inhibition of HIV-1 by PF74.

Akatsuki Saito, Damien Ferhadian, Gregory A Sowd, Erik Serrao, Jiong Shi, Upul D Halambage, Samantha Teng, Juan Soto, Mohammad Adnan Siddiqui, Alan N Engelman and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 73 papers.

0numbers the graph read from it
0cells of the map it votes in
73citing papers in PubMed
4.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

73 citing papers in PubMed, 88 citations in OpenAlex.

  1. Article
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  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Cyclophilin A Regulates Tripartite Motif 5 Alpha Restriction of HIV-1.International journal of molecular sciences · 2025
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Article

13 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Akatsuki SaitoAaron Diamond AIDS Research Center, New York, New York, USA.
Damien FerhadianAaron Diamond AIDS Research Center, New York, New York, USA.
Gregory A SowdDana Farber Cancer Institute, Department of Cancer Immunology and Virology, Boston, Massachusetts, USA.
Erik SerraoDana Farber Cancer Institute, Department of Cancer Immunology and Virology, Boston, Massachusetts, USA.
Jiong ShiDepartment of Pathology, Microbiology and Immunology, Vanderbilt University School of Medicine, Nashville, Tennessee, USA.
Upul D HalambageDepartment of Pathology, Microbiology and Immunology, Vanderbilt University School of Medicine, Nashville, Tennessee, USA.
Samantha TengAaron Diamond AIDS Research Center, New York, New York, USA.
Juan SotoAaron Diamond AIDS Research Center, New York, New York, USA.
Mohammad Adnan SiddiquiAaron Diamond AIDS Research Center, New York, New York, USA.
Alan N EngelmanDana Farber Cancer Institute, Department of Cancer Immunology and Virology, Boston, Massachusetts, USA.
Christopher AikenDepartment of Pathology, Microbiology and Immunology, Vanderbilt University School of Medicine, Nashville, Tennessee, USA.
Masahiro YamashitaAaron Diamond AIDS Research Center, New York, New York, USA myamashi@adarc.org.
Aaron Diamond AIDS Research Center · USDana-Farber Cancer Institute · USVanderbilt University · US

Funding

X-Ray Core P50GM082251 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CALERO, GUILLERMO ALBERTO · 2007 to 2018
$48.1M
Nuclear Localization of HIV-1 Preintegration ComplexesR01AI052014 · NIAID · DANA-FARBER CANCER INSTITUTE · PI ENGELMAN, ALAN N. · 2003 to 2025
$11.4M
Mechanism and role of nuclear entry in HIV-1 replicationR01AI100720 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Masahiro Yamashita · 2012 to 2026
$6.5M
A Competition Binding Assay for Identifying Novel HIV-1 Capsid LigandsR01AI114339 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI AIKEN, CHRISTOPHER R · 2014 to 2016
$1.1M
NIAID NIH HHS R01 AI052014NIAID NIH HHS R01 AI100720NIAID NIH HHS R01 AI114339NIGMS NIH HHS P50 GM082251
6 · The paper itself

Abstract

unlabelledThe viral capsid of HIV-1 interacts with a number of host factors to orchestrate uncoating and regulate downstream events, such as reverse transcription, nuclear entry, and integration site targeting. PF-3450074 (PF74), an HIV-1 capsid-targeting low-molecular-weight antiviral compound, directly binds to the capsid (CA) protein at a site also utilized by host cell proteins CPSF6 and NUP153. Here, we found that the dose-response curve of PF74 is triphasic, consisting of a plateau and two inhibitory phases of different slope values, consistent with a bimodal mechanism of drug action. High PF74 concentrations yielded a steep curve with the highest slope value among different classes of known antiretrovirals, suggesting a dose-dependent, cooperative mechanism of action. CA interactions with both CPSF6 and cyclophilin A (CypA) were essential for the unique dose-response curve. A shift of the steep curve at lower drug concentrations upon blocking the CA-CypA interaction suggests a protective role for CypA against high concentrations of PF74. These findings, highlighting the unique characteristics of PF74, provide a model in which its multimodal mechanism of action of both noncooperative and cooperative inhibition by PF74 is regulated by interactions of cellular proteins with incoming viral capsids. IMPORTANCE: PF74, a novel capsid-targeting antiviral against HIV-1, shares its binding site in the viral capsid protein (CA) with the host factors CPSF6 and NUP153. This work reveals that the dose-response curve of PF74 consists of two distinct inhibitory phases that are differentially regulated by CA-interacting host proteins. PF74's potency depended on these CA-binding factors at low doses. In contrast, the antiviral activity of high PF74 concentrations was attenuated by cyclophilin A. These observations provide novel insights into both the mechanism of action of PF74 and the roles of host factors during the early steps of HIV-1 infection.

Indexed as

Host-Pathogen InteractionsAnti-HIV AgentsBinding SitesCapsidCapsid ProteinsCyclophilin AHEK293 CellsHeLa CellsHIV-1HumansIndolesmRNA Cleavage and Polyadenylation FactorsNuclear Pore Complex ProteinsPhenylalanineReverse TranscriptionVirus ReplicationAnti-HIV AgentsCapsid Proteinscleavage factor Im, humanCyclophilin AIndolesmRNA Cleavage and Polyadenylation FactorsNuclear Pore Complex ProteinsNUP153 protein, humanPF-3450074Phenylalanine

Identifiers

PMID27076642
PMCPMC4886767
OpenAlexW2341424940

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.