Evidence map›Paper›PMID 27075897›Full record

ArticleMycorrhiza2016

RiPEIP1, a gene from the arbuscular mycorrhizal fungus Rhizophagus irregularis, is preferentially expressed in planta and may be involved in root colonization.

Valentina Fiorilli, Simone Belmondo, Hassine Radhouane Khouja, Simona Abbà, Antonella Faccio, Stefania Daghino, Luisa Lanfranco

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In one paragraph

Article in Mycorrhiza, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
7.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Fungi Inhabiting the Wheat Endosphere.Pathogens (Basel, Switzerland) · 2021
    Review
  4. Review
  5. Article
  6. Article
  7. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Valentina FiorilliDepartment of Life Science and Systems Biology, University of Torino, via Accademia Albertina 13, 10123, Torino, Italy. valentina.fiorilli@unito.it.
Simone BelmondoDepartment of Life Science and Systems Biology, University of Torino, via Accademia Albertina 13, 10123, Torino, Italy.
Hassine Radhouane KhoujaDepartment of Life Science and Systems Biology, University of Torino, via Accademia Albertina 13, 10123, Torino, Italy.
Simona AbbàInstitute for Sustainable Plant Protection (IPSP), CNR, Strada delle Cacce 73, 10135, Torino, Italy.
Antonella FaccioInstitute for Sustainable Plant Protection (IPSP), CNR, Strada delle Cacce 73, 10135, Torino, Italy.
Stefania DaghinoDepartment of Life Science and Systems Biology, University of Torino, via Accademia Albertina 13, 10123, Torino, Italy.
Luisa LanfrancoDepartment of Life Science and Systems Biology, University of Torino, via Accademia Albertina 13, 10123, Torino, Italy.
Accademia Albertina delle Belle Arti · ITInstitute for Sustainable Plant Protection · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transcriptomics and genomics data recently obtained from the arbuscular mycorrhizal (AM) fungus Rhizophagus irregularis have offered new opportunities to decipher the contribution of the fungal partner to the establishment of the symbiotic association. The large number of genes which do not show similarity to known proteins witnesses the uniqueness of this group of plant-associated fungi. In this work, we characterize a gene that was called RiPEIP1 (Preferentially Expressed In Planta). Its expression is strongly induced in the intraradical phase, including arbuscules, and follows the expression profile of the Medicago truncatula phosphate transporter MtPT4, a molecular marker of a functional symbiosis. Indeed, mtpt4 mutant plants, which exhibit low mycorrhizal colonization and an accelerated arbuscule turnover, also show a reduced RiPEIP1 mRNA abundance. To further characterize RiPEIP1, in the absence of genetic transformation protocols for AM fungi, we took advantage of two different fungal heterologous systems. When expressed as a GFP fusion in yeast cells, RiPEIP1 localizes in the endomembrane system, in particular to the endoplasmic reticulum, which is consistent with the in silico prediction of four transmembrane domains. We then generated RiPEIP1-expressing strains of the fungus Oidiodendron maius, ericoid endomycorrhizal fungus for which transformation protocols are available. Roots of Vaccinium myrtillus colonized by RiPEIP1-expressing transgenic strains showed a higher mycorrhization level compared to roots colonized by the O. maius wild-type strain, suggesting that RiPEIP1 may regulate the root colonization process.

Indexed as

Fungal ProteinsGene Expression Regulation, FungalGlomeromycotaGreen Fluorescent ProteinsMedicago truncatulaMycorrhizaePlant RootsYeastsFungal ProteinsGreen Fluorescent ProteinsArbuscular mycorrhizal symbiosisHeterologous expression systemOidiodendron maiusRhizophagus irregularis

Identifiers

PMID27075897
OpenAlexW2338479095

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.