Evidence map›Paper›PMID 27074683›Full record

ArticleBiophysical journal2016

Size, Kinetics, and Free Energy of Clusters Formed by Ultraweak Carbohydrate-Carbohydrate Bonds.

Hannes Witt, Filip Savić, Marieelen Oelkers, Shahid I Awan, Daniel B Werz, Burkhard Geil, Andreas Janshoff

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Membrane fusion studied by colloidal probes.European biophysics journal : EBJ · 2021
    Review
  3. Review
  4. Interplay ofFrontiers in molecular biosciences · 2021
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Hannes WittInstitute of Physical Chemistry, Georg-August-Universität, Göttingen, Germany.
Filip SavićInstitute of Physical Chemistry, Georg-August-Universität, Göttingen, Germany.
Marieelen OelkersInstitute of Physical Chemistry, Georg-August-Universität, Göttingen, Germany.
Shahid I AwanInstitute of Organic and Biomolecular Chemistry, Georg-August-Universität, Göttingen, Germany.
Daniel B WerzTechnische Universität Braunschweig, Institute of Organic Chemistry, Braunschweig, Germany.
Burkhard GeilInstitute of Physical Chemistry, Georg-August-Universität, Göttingen, Germany.
Andreas JanshoffInstitute of Physical Chemistry, Georg-August-Universität, Göttingen, Germany. Electronic address: ajansho@gwdg.de.
University of Göttingen · DETechnische Universität Braunschweig · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Weak noncovalent intermolecular interactions play a pivotal role in many biological processes such as cell adhesion or immunology, where the overall binding strength is controlled through bond association and dissociation dynamics as well as the cooperative action of many parallel bonds. Among the various molecules participating in weak bonds, carbohydrate-carbohydrate interactions are probably the most ancient ones allowing individual cells to reversibly enter the multicellular state and to tell apart self and nonself cells. Here, we scrutinized the kinetics and thermodynamics of small homomeric Lewis X-Lewis X ensembles formed in the contact zone of a membrane-coated colloidal probe and a solid supported membrane ensuring minimal nonspecific background interactions. We used an atomic force microscope to measure force distance curves at Piconewton resolution, which allowed us to measure the force due to unbinding of the colloidal probe and the planar membrane as a function of contact time. Applying a contact model, we could estimate the free binding energy of the formed adhesion cluster as a function of dwell time and thereby determine the precise size of the contact zone, the number of participating bonds, and the intrinsic rates of association and dissociation in the presence of calcium ions. The unbinding energy per bond was found to be on the order of 1 kBT. Approximately 30 bonds were opened simultaneously at an off-rate of koff = 7 ± 0.2 s(-1).

Indexed as

Cell MembraneKineticsMembrane LipidsMicroscopy, Atomic ForceModels, MolecularThermodynamicsTrisaccharidesMembrane LipidsTrisaccharides

Identifiers

PMID27074683
PMCPMC4833834
OpenAlexW2337879227

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.