Evidence map›Paper›PMID 27073192›Full record

ArticleJournal of biomolecular screening2016

A Quantitative Spectrophotometric Assay to Monitor the tRNA-Dependent Pathway for Lipid Aminoacylation In Vitro.

Christopher D Grube, Hervé Roy

Open access · hybridAbstract read
In one paragraph

Article in Journal of biomolecular screening, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Metabolomic Profiles of Multidrug-ResistantAnimals : an open access journal from MDPI · 2022
    Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Christopher D GrubeBurnett School of Biomedical Sciences, College of Medicine, University of Central Florida, Orlando, FL, USA.
Hervé RoyBurnett School of Biomedical Sciences, College of Medicine, University of Central Florida, Orlando, FL, USA herve.roy@ucf.edu.
University of Central Florida · US

Funding

Biochemistry and role of an RNA-dependent membrane modification pathwayR15GM109404 · NIGMS · UNIVERSITY OF CENTRAL FLORIDA · PI ROY, HERVE · 2014 to 2014
$311k
NIGMS NIH HHS R15 GM109404
6 · The paper itself

Abstract

The transfer RNA (tRNA)-dependent pathway for lipid aminoacylation is a two-step pathway composed of (1) a tRNA aminoacylation step catalyzed by an aminoacyl-tRNA synthetase, forming a specific aa-tRNA, and (2) a tRNA-dependent transfer step in which the amino acid acylating the tRNA is transferred to an acceptor lipid. The latter step is catalyzed by a transferase located within the cytoplasmic membrane of certain bacteria. Lipid aminoacylation modifies the biochemical properties of the membrane and enhances resistance of some pathogens to various classes of antimicrobial agents and components of the innate immune response. Lipid aminoacylation has also been linked to increased virulence of various pathogenic bacteria. Inhibition of this mechanism would render pathogens more susceptible to existing drugs or to natural defenses of a host organism. Because lipid aminoacylation is widespread in many bacterial genera and absent from eukaryotes, and because the tRNA aminoacylation step of this pathway is also used in protein biosynthesis (a process essential for bacterial life), this pathway represents an attractive target for drug design. We have reconstituted the lipid aminoacylation pathway in vitro and optimized it for high-throughput screening of libraries of compounds to simultaneously identify inhibitors targeting each step of the pathway in a single assay.

Indexed as

AminoacylationAmino Acyl-tRNA SynthetasesAnti-Infective AgentsCell MembraneEnzyme InhibitorsHigh-Throughput Screening AssaysLipidsRNA, TransferSignal TransductionSmall Molecule LibrariesTransferasesAmino Acyl-tRNA SynthetasesAnti-Infective AgentsEnzyme InhibitorsLipidsRNA, TransferSmall Molecule LibrariesTransferasesalanyl-diacylglycerol synthase (AlaDAGS)aminoacyl-phosphatidylglycerol synthase (aaPGS)aminoacyl-tRNA synthetase (aaRS)high-throughput screening (HTS)tRNA

Identifiers

PMID27073192
PMCPMC5938733
OpenAlexW2340916217

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.