Evidence map›Paper›PMID 27072995›Full record

ArticleThe EMBO journal2016

Nucleosomal arrays self-assemble into supramolecular globular structures lacking 30-nm fibers.

Kazuhiro Maeshima, Ryan Rogge, Sachiko Tamura, Yasumasa Joti, Takaaki Hikima, Heather Szerlong, Christine Krause, Jake Herman, Erik Seidel, Jennifer DeLuca and 2 more

Open access · greenAbstract read
In one paragraph

Article in The EMBO journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 108 papers.

0numbers the graph read from it
0cells of the map it votes in
108citing papers in PubMed
14.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

108 citing papers in PubMed, 221 citations in OpenAlex.

  1. Chromatin Packing Domain Engineering Through the Manipulation of Nuclear Cationic States.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
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  5. Review
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  10. Solution conformational differences between conventional and CENP-A nucleosomes are accentuated by reversible deformation under high pressure.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2025
    Article
  11. The shifting paradigm of chromatin structure: from the 30-nm chromatin fiber to liquid-like organization.Proceedings of the Japan Academy. Series B, Physical and biological sciences · 2025
    Review
  12. Phase Separation in Chromatin Organization and Human Diseases.International journal of molecular sciences · 2025
    Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Beyond the mono-nucleosome.Biochemical Society transactions · 2025
    Review
  18. Article
  19. Article
  20. Review

48 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Kazuhiro MaeshimaBiological Macromolecules Laboratory, Structural Biology Center, National Institute of Genetics and Department of Genetics, Sokendai (Graduate University for Advanced Studies), Mishima, Japan RIKEN SPring-8 Center, Sayo-cho, Sayo-gun, Japan kmaeshim@nig.ac.jp jeffrey.c.hansen@colostate.edu.ORCID 0000-0003-3909-0341
Ryan RoggeDepartment of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, CO, USA.
Sachiko TamuraBiological Macromolecules Laboratory, Structural Biology Center, National Institute of Genetics and Department of Genetics, Sokendai (Graduate University for Advanced Studies), Mishima, Japan.
Yasumasa JotiRIKEN SPring-8 Center, Sayo-cho, Sayo-gun, Japan XFEL Utilization Division, Japan Synchrotron Radiation Research Institute (JASRI), Sayo-gun, Japan.
Takaaki HikimaRIKEN SPring-8 Center, Sayo-cho, Sayo-gun, Japan.
Heather SzerlongDepartment of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, CO, USA.
Christine KrauseDepartment of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, CO, USA.
Jake HermanDepartment of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, CO, USA.
Erik SeidelDepartment of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, CO, USA.
Jennifer DeLucaDepartment of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, CO, USA.
Tetsuya IshikawaRIKEN SPring-8 Center, Sayo-cho, Sayo-gun, Japan.
Jeffrey C HansenDepartment of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, CO, USA kmaeshim@nig.ac.jp jeffrey.c.hansen@colostate.edu.ORCID 0000-0003-1857-4689
Colorado State University · USSPring-8 · JPNational Institute of Genetics · JP

Funding

CHROMATIN STRUCTURE AND STABILITY IN THE SOLUTION STATER01GM045916 · NIGMS · UNIVERSITY OF TEXAS HLTH SCI CTR SAN ANT · PI HANSEN, JEFFREY C · 1996 to 2012
$3.3M
Kinetochore Function in Vertebrate CellsR01GM088371 · NIGMS · COLORADO STATE UNIVERSITY · PI DELUCA, JENNIFER G · 2010 to 2018
$3.1M
NIGMS NIH HHS R01 GM045916NIGMS NIH HHS R01 GM088371
6 · The paper itself

Abstract

The existence of a 30-nm fiber as a basic folding unit for DNA packaging has remained a topic of active discussion. Here, we characterize the supramolecular structures formed by reversible Mg(2+)-dependent self-association of linear 12-mer nucleosomal arrays using microscopy and physicochemical approaches. These reconstituted chromatin structures, which we call "oligomers", are globular throughout all stages of cooperative assembly and range in size from ~50 nm to a maximum diameter of ~1,000 nm. The nucleosomal arrays were packaged within the oligomers as interdigitated 10-nm fibers, rather than folded 30-nm structures. Linker DNA was freely accessible to micrococcal nuclease, although the oligomers remained partially intact after linker DNA digestion. The organization of chromosomal fibers in human nuclei in situ was stabilized by 1 mM MgCl2, but became disrupted in the absence of MgCl2, conditions that also dissociated the oligomers in vitro These results indicate that a 10-nm array of nucleosomes has the intrinsic ability to self-assemble into large chromatin globules stabilized by nucleosome-nucleosome interactions, and suggest that the oligomers are a good in vitro model for investigating the structure and organization of interphase chromosomes.

Indexed as

DNAHeLa CellsHumansMagnesium ChlorideMicrococcal NucleaseNucleosomesDNAMagnesium ChlorideMicrococcal NucleaseNucleosomes10‐nm chromatin fiberanalytical ultracentrifugationmicroscopynucleosomal arrayX‐ray scattering

Identifiers

PMID27072995
PMCPMC4868957
OpenAlexW2340505447

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.