Evidence map›Paper›PMID 27071091›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Heterozygous colon cancer-associated mutations of SAMHD1 have functional significance.

Matilda Rentoft, Kristoffer Lindell, Phong Tran, Anna Lena Chabes, Robert J Buckland, Danielle L Watt, Lisette Marjavaara, Anna Karin Nilsson, Beatrice Melin, Johan Trygg and 2 more

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 82 papers.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed
10.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed, 112 citations in OpenAlex.

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  17. SAMHD1 restricts the deoxyguanosine triphosphate pool contributing to telomere stability in telomerase-positive cells.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2023
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22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Matilda RentoftComputational Life Science Cluster, Department of Chemistry, Umeå University, Umea SE 901 87, Sweden; Department of Medical Biochemistry and Biophysics, Umeå University, Umea SE 901 87, Sweden;
Kristoffer LindellDepartment of Medical Biochemistry and Biophysics, Umeå University, Umea SE 901 87, Sweden;
Phong TranDepartment of Medical Biochemistry and Biophysics, Umeå University, Umea SE 901 87, Sweden;
Anna Lena ChabesDepartment of Medical Biochemistry and Biophysics, Umeå University, Umea SE 901 87, Sweden;
Robert J BucklandDepartment of Medical Biochemistry and Biophysics, Umeå University, Umea SE 901 87, Sweden;ORCID http://orcid.org/0000-0001-9749-5422
Danielle L WattDepartment of Medical Biochemistry and Biophysics, Umeå University, Umea SE 901 87, Sweden;
Lisette MarjavaaraDepartment of Medical Biochemistry and Biophysics, Umeå University, Umea SE 901 87, Sweden;
Anna Karin NilssonDepartment of Medical Biochemistry and Biophysics, Umeå University, Umea SE 901 87, Sweden;
Beatrice MelinDepartment of Radiation Sciences, Umeå University, Umea SE 901 87, Sweden.
Johan TryggComputational Life Science Cluster, Department of Chemistry, Umeå University, Umea SE 901 87, Sweden;
Erik JohanssonDepartment of Medical Biochemistry and Biophysics, Umeå University, Umea SE 901 87, Sweden;
Andrei ChabesDepartment of Medical Biochemistry and Biophysics, Umeå University, Umea SE 901 87, Sweden; andrei.chabes@umu.se.ORCID http://orcid.org/0000-0003-1708-8259
Umeå University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Even small variations in dNTP concentrations decrease DNA replication fidelity, and this observation prompted us to analyze genomic cancer data for mutations in enzymes involved in dNTP metabolism. We found that sterile alpha motif and histidine-aspartate domain-containing protein 1 (SAMHD1), a deoxyribonucleoside triphosphate triphosphohydrolase that decreases dNTP pools, is frequently mutated in colon cancers, that these mutations negatively affect SAMHD1 activity, and that several SAMHD1 mutations are found in tumors with defective mismatch repair. We show that minor changes in dNTP pools in combination with inactivated mismatch repair dramatically increase mutation rates. Determination of dNTP pools in mouse embryos revealed that inactivation of one SAMHD1 allele is sufficient to elevate dNTP pools. These observations suggest that heterozygous cancer-associated SAMHD1 mutations increase mutation rates in cancer cells.

Indexed as

AnimalsCell Line, TumorColonic NeoplasmsDeoxyribonucleotidesDNA, NeoplasmDNA ReplicationGenetic Predisposition to DiseaseHeterozygoteHumansMiceMice, Inbred C57BLMonomeric GTP-Binding ProteinsMutationPolymorphism, Single NucleotideSAM Domain and HD Domain-Containing Protein 1DeoxyribonucleotidesDNA, NeoplasmMonomeric GTP-Binding ProteinsSAM Domain and HD Domain-Containing Protein 1SAMHD1 protein, humanSamhd1 protein, mousecolon cancerDNA replication fidelitydNTP pools

Identifiers

PMID27071091
PMCPMC4855590
OpenAlexW2335902060

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.