Evidence map›Paper›PMID 27068746›Full record

ArticleThe Journal of biological chemistry2016

Direct Demonstration That Loop1 of Scap Binds to Loop7: A CRUCIAL EVENT IN CHOLESTEROL HOMEOSTASIS.

Yinxin Zhang, Kwang Min Lee, Lisa N Kinch, Lindsay Clark, Nick V Grishin, Daniel M Rosenbaum, Michael S Brown, Joseph L Goldstein, Arun Radhakrishnan

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. PI3K Signaling at the Crossroads of Lipid Metabolism and Cancer.Advances in experimental medicine and biology · 2025
    Review
  3. Article
  4. Article
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  8. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Yinxin ZhangFrom the Departments of Molecular Genetics.
Kwang Min LeeFrom the Departments of Molecular Genetics.
Lisa N KinchHoward Hughes Medical Institute, University of Texas Southwestern Medical Center, Dallas, Texas 75390.
Lindsay ClarkBiophysics, and.
Nick V GrishinHoward Hughes Medical Institute, University of Texas Southwestern Medical Center, Dallas, Texas 75390; Biophysics, and; Biochemistry and.
Daniel M RosenbaumBiophysics, and; Biochemistry and.
Michael S BrownFrom the Departments of Molecular Genetics,. Electronic address: mike.brown@utsouthwestern.edu.
Joseph L GoldsteinFrom the Departments of Molecular Genetics,. Electronic address: joe.goldstein@utsouthwestern.edu.
Arun RadhakrishnanFrom the Departments of Molecular Genetics,. Electronic address: arun.radhakrishnan@utsouthwestern.edu.
Laboratory of Molecular Genetics · PLHoward Hughes Medical Institute · USSouthwestern Medical Center · US

Funding

TRANSCRIPTIONAL REGULATION OF LDL RECEPTOR PROMOTERP01HL020948 · NHLBI · UT SOUTHWESTERN MEDICAL CENTER · PI GOLDSTEIN, JOSEPH L · 1985 to 2021
$103.1M
Computational methods for structural-functional studies of proteinsR01GM094575 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI GRISHIN, NICK V. · 2010 to 2017
$2.4M
Molecular mechanism of a master regulator of sterol homeostasisR01GM113050 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI ROSENBAUM, DANIEL · 2015 to 2019
$1.5M
NHLBI NIH HHS P01 HL020948NIGMS NIH HHS R01 GM094575NIGMS NIH HHS R01 GM113050
6 · The paper itself

Abstract

Cholesterol homeostasis is mediated by Scap, a polytopic endoplasmic reticulum (ER) protein that transports sterol regulatory element-binding proteins from the ER to Golgi, where they are processed to forms that activate cholesterol synthesis. Scap has eight transmembrane helices and two large luminal loops, designated Loop1 and Loop7. We earlier provided indirect evidence that Loop1 binds to Loop7, allowing Scap to bind COPII proteins for transport in coated vesicles. When ER cholesterol rises, it binds to Loop1. We hypothesized that this causes dissociation from Loop7, abrogating COPII binding. Here we demonstrate direct binding of the two loops when expressed as isolated fragments or as a fusion protein. Expressed alone, Loop1 remained intracellular and membrane-bound. When Loop7 was co-expressed, it bound to Loop1, and the soluble complex was secreted. A Loop1-Loop7 fusion protein was also secreted, and the two loops remained bound when the linker between them was cleaved by a protease. Point mutations that disrupt the Loop1-Loop7 interaction prevented secretion of the Loop1-Loop7 fusion protein. These data provide direct documentation of intramolecular Loop1-Loop7 binding, a central event in cholesterol homeostasis.

Indexed as

Protein DomainsProtein Structure, SecondaryAmino Acid SequenceAnimalsCHO CellsCholesterolCOP-Coated VesiclesCricetinaeCricetulusCytoplasmEndoplasmic ReticulumGolgi ApparatusHomeostasisImmunoblottingIntracellular Signaling Peptides and ProteinsMembrane ProteinsCholesterolIntracellular Signaling Peptides and ProteinsMembrane ProteinsSREBP cleavage-activating proteinVesicular Transport Proteinscholesterol-binding proteincholesterol regulationmembrane functionmembrane lipidmembrane protein

Identifiers

PMID27068746
PMCPMC4933461
OpenAlexW2333448764

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.