Evidence map›Paper›PMID 27067543›Full record

ArticleNucleic acids research2016

Identification and characterization of an hnRNP E1 translational silencing motif.

Andrew S Brown, Bidyut K Mohanty, Philip H Howe

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 33 citations in OpenAlex.

  1. Review
  2. Article
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  5. Review
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  11. Expression of hnRNPK & Claudin-4 in HCV-Induced Early HCC and Adjacent Liver Tissue.Open access Macedonian journal of medical sciences · 2017
    Article
  12. Article
  13. Poly r(C) binding protein is post-transcriptionally repressed by MiR-490-3p to potentiate squamous cell carcinoma.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Andrew S BrownDepartment of Biochemistry, Medical University of South Carolina, 173 Ashley Avenue, Charleston, SC 29425, USA Department of Biomedical Science, Kent State University, 800 East Summit Street, Kent, OH 44240, USA.
Bidyut K MohantyDepartment of Biochemistry, Medical University of South Carolina, 173 Ashley Avenue, Charleston, SC 29425, USA.
Philip H HoweDepartment of Biochemistry, Medical University of South Carolina, 173 Ashley Avenue, Charleston, SC 29425, USA howep@musc.edu.
Medical University of South Carolina · US

Funding

TRANSFORMING GROWTH FACTOR BETA SIGNALING PATHWAYSR01CA055536 · NCI · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI HOWE, PHILIP H · 1997 to 2017
$5.0M
NCI NIH HHS R01 CA055536
6 · The paper itself

Abstract

Non-canonical transforming growth factor β (TGFβ) signaling through protein kinase B (Akt2) induces phosphorylation of heterogeneous nuclear ribonucleoprotein E1 (hnRNP E1) at serine-43 (p-hnRNP E1). This post-translational modification (PTM) of hnRNP E1 promotes its dissociation from a 3' untranslated region (UTR) nucleic acid regulatory motif, driving epithelial to mesenchymal transition (EMT) and metastasis. We have identified an hnRNP E1 consensus-binding motif and genomically resolved a subset of genes in which it is contained. This study characterizes the binding kinetics of the consensus-binding motif and hnRNP E1, its various K-homology (KH) domains and p-hnRNP E1. Levels of p-hnRNP E1 are highly upregulated in metastatic cancer cells and low in normal epithelial tissue. We show a correlation between this PTM and levels of Akt2 and its activated form, phosphorylated serine-474 (p-Akt2). Using cellular progression models of metastasis, we observed a signature high level of Akt2, p-Akt2 and p-hnRNP E1 protein expression, coupled to a significantly reduced level of total hnRNP E1 in metastatic cells. Genes that are translationally silenced by hnRNP E1 and expressed by its dissociation are highly implicated in the progression of EMT and metastasis. This study provides insight into a non-canonical TGFβ signaling cascade that is responsible for inducing EMT by aberrant expression of hnRNP E1 silenced targets. The relevance of this system in metastatic progression is clearly shown in cellular models by the high abundance of p-hnRNP E1 and low levels of hnRNP E1. New insights provided by the resolution of this molecular mechanism provide targets for therapeutic intervention and give further insight into the role of the TGFβ microenvironment.

Indexed as

Gene Expression Regulation, NeoplasticProtein Processing, Post-Translational3' Untranslated RegionsBase SequenceBinding SitesCaco-2 CellsCell Line, TumorDNA-Binding ProteinsEpithelial-Mesenchymal TransitionHCT116 CellsHeterogeneous-Nuclear RibonucleoproteinsHT29 CellsHumansNeoplasm MetastasisPhosphorylationProtein Binding3' Untranslated RegionsAKT2 protein, humanDNA-Binding ProteinsHeterogeneous-Nuclear RibonucleoproteinsPCBP1 protein, humanProto-Oncogene Proteins c-aktRecombinant ProteinsRNA-Binding ProteinsSerineTransforming Growth Factor beta

Identifiers

PMID27067543
PMCPMC4937310
OpenAlexW2340824560

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.