Evidence map›Paper›PMID 27067024›Full record

ArticleMalaria journal2016

Global genetic diversity of the Plasmodium vivax transmission-blocking vaccine candidate Pvs48/45.

Andres F Vallejo, Nora L Martinez, Alejandra Tobon, Jackeline Alger, Marcus V Lacerda, Andrey V Kajava, Myriam Arévalo-Herrera, Sócrates Herrera

Open access · goldAbstract read
In one paragraph

Article in Malaria journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 28 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 5 countries.

Andres F VallejoMalaria Vaccine and Drug Development Center, Cali, Colombia.
Nora L MartinezMalaria Vaccine and Drug Development Center, Cali, Colombia.
Alejandra TobonMalaria Vaccine and Drug Development Center, Cali, Colombia.
Jackeline AlgerFacultad de Ciencias Médicas, Hospital Escuela Universitario, Universidad Nacional Autónoma de Honduras, Tegucigalpa, Honduras.
Marcus V LacerdaFundação de Medicina Tropical Dr. Heitor Vieira Dourado, Manaus, Brazil.
Andrey V KajavaCentre de Recherches Biochimie Macromoléculaire (CRBM), Institut de Biologie Computationnelle (IBC), CNRS, University of Montpellier, Montpellier, France.
Myriam Arévalo-HerreraCaucaseco Scientific Research Center, Cali, Colombia.
Sócrates HerreraCaucaseco Scientific Research Center, Cali, Colombia. sherrera@inmuno.org.
Caucaseco Scientific Research Center · COFundação de Medicina Tropical · BRNational Autonomous University of Honduras · HNUniversidad del Valle · COUniversité de Montpellier · FR

Funding

Vector Biology Research and Integrated Vector Management For Malaria ControlU19AI089702 · NIAID · CAUCASECO SCIENTIFIC RESEARCH CENTER · PI HERRERA VALENCIA, SOCRATES · 2010 to 2016
$11.5M
NIAID NIH HHS 1R01AI12123701NIAID NIH HHS U19 AI089702NIAID NIH HHS U19AI089702
6 · The paper itself

Abstract

backgroundPlasmodium vivax 48/45 protein is expressed on the surface of gametocytes/gametes and plays a key role in gamete fusion during fertilization. This protein was recently expressed in Escherichia coli host as a recombinant product that was highly immunogenic in mice and monkeys and induced antibodies with high transmission-blocking activity, suggesting its potential as a P. vivax transmission-blocking vaccine candidate. To determine sequence polymorphism of natural parasite isolates and its potential influence on the protein structure, all pvs48/45 sequences reported in databases from around the world as well as those from low-transmission settings of Latin America were compared.

methodsPlasmodium vivax parasite isolates from malaria-endemic regions of Colombia, Brazil and Honduras (n = 60) were used to sequence the Pvs48/45 gene, and compared to those previously reported to GenBank and PlasmoDB (n = 222). Pvs48/45 gene haplotypes were analysed to determine the functional significance of genetic variation in protein structure and vaccine potential.

resultsNine non-synonymous substitutions (E35K, Y196H, H211N, K250N, D335Y, E353Q, A376T, K390T, K418R) and three synonymous substitutions (I73, T149, C156) that define seven different haplotypes were found among the 282 isolates from nine countries when compared with the Sal I reference sequence. Nucleotide diversity (π) was 0.00173 for worldwide samples (range 0.00033-0.00216), resulting in relatively high diversity in Myanmar and Colombia, and low diversity in Mexico, Peru and South Korea. The two most frequent substitutions (E353Q: 41.9 %, K250N: 39.5 %) were predicted to be located in antigenic regions without affecting putative B cell epitopes or the tertiary protein structure.

conclusionsThere is limited sequence polymorphism in pvs48/45 with noted geographical clustering among Asian and American isolates. The low genetic diversity of the protein does not influence the predicted antigenicity or protein structure and, therefore, supports its further development as transmission-blocking vaccine candidate.

Indexed as

Genetic VariationPolymorphism, GeneticAmino Acid SubstitutionAnimalsAntigens, ProtozoanAotidaeHaplotypesImmunogenicity, VaccineMalaria VaccinesMalaria, VivaxMicePlasmodium vivaxProtozoan ProteinsSequence Analysis, DNAAntigens, ProtozoanMalaria VaccinesProtozoan Proteins

Identifiers

PMID27067024
PMCPMC4828788
OpenAlexW2341890653

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.