Evidence map›Paper›PMID 27066866›Full record

ReviewTrends in genetics : TIG2016

To Be Specific or Not: The Critical Relationship Between Hox And TALE Proteins.

Samir Merabet, Richard S Mann

Abstract readReview
In one paragraph

Review in Trends in genetics : TIG, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 75 papers.

0numbers the graph read from it
0cells of the map it votes in
75citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

75 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. TALE and Hox Transcription Factors Control Adult Behaviors in Zebrafish.bioRxiv : the preprint server for biology · 2026
    Article
  5. Article
  6. Article
  7. Homeodomain Involvement in Nuclear HOX Protein Homo- and Heterodimerization.International journal of molecular sciences · 2025
    Article
  8. Article
  9. Biology of Hox Genes: Questions and Technological Challenges.Methods in molecular biology (Clifton, N.J.) · 2025
    Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Floral Homeotic Factors: A Question of Specificity.Plants (Basel, Switzerland) · 2023
    Review
  17. Hox genes in development and beyond.Development (Cambridge, England) · 2023
    Article
  18. Article
  19. Article
  20. Article

15 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Samir MerabetInstitut de Génomique Fonctionnelle de Lyon, Centre National de Recherche Scientifique, Ecole Normale Supérieure de Lyon, France. Electronic address: samir.merabet@ens-lyon.fr.
Richard S MannColumbia University Medical Center, New York, NY, USA. Electronic address: rsmann10@gmail.com.

Funding

Interpreting and Deploying Genomic Information During Animal DevelopmentR35GM118336 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI RICHARD S MANN · 2016 to 2026
$6.9M
MOLECULAR GENETICS OF SEGMENT IDENTITYR01GM054510 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MANN, RICHARD S · 1996 to 2015
$5.5M
NIGMS NIH HHS R01 GM054510NIGMS NIH HHS R35 GM118336
6 · The paper itself

Abstract

Hox proteins are key regulatory transcription factors that act in different tissues of the embryo to provide specific spatial and temporal coordinates to each cell. These patterning functions often depend on the presence of the TALE-homeodomain class cofactors, which form cooperative DNA-binding complexes with all Hox proteins. How this family of cofactors contributes to the highly diverse and specific functions of Hox proteins in vivo remains an important unsolved question. We review here the most recent advances in understanding the molecular mechanisms underlying Hox-TALE function. In particular, we discuss the role of DNA shape, DNA-binding affinity, and protein-protein interaction flexibility in dictating Hox-TALE specificity. We propose several models to explain how these mechanisms are integrated with each other in the context of the many distinct functions that Hox and TALE factors carry out in vivo.

Indexed as

Amino Acid SequenceAnimalsDNADNA-Binding ProteinsGene Expression Regulation, DevelopmentalHomeodomain ProteinsProtein BindingProtein Interaction MapsDNADNA-Binding ProteinsHomeodomain ProteinsDNA-binding specificityhomeodomainsHox proteinsSELEX-seqSPIMsTALE cofactors

Identifiers

PMID27066866
PMCPMC4875764

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.