Evidence map›Paper›PMID 27066567›Full record

ArticleNeurology. Genetics2015

Mutation in PNKP presenting initially as axonal Charcot-Marie-Tooth disease.

José Luiz Pedroso, Clarissa R R Rocha, Lucia I Macedo-Souza, Vitor De Mario, Wilson Marques, Orlando G P Barsottini, Acary S Bulle Oliveira, Carlos F M Menck, Fernando Kok

Open access · goldAbstract read
In one paragraph

Article in Neurology. Genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.0field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 32 citations in OpenAlex.

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  13. Ataxia with Oculomotor Apraxia Type 4 withJournal of pediatric genetics · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

José Luiz PedrosoDepartment of Neurology (J.L.P., O.G.P.B., A.S.B.O.), Federal University of São Paulo, São Paulo, Brazil; Department of Microbiology (C.R.R.R., C.F.M.M.), Institute of Biomedical Sciences, and Center for Human Genome and Stem Cell Research (L.I.M.-S., F.K.), Institute of Biosciences, University of São Paulo, São Paulo, Brazil; Mendelics Genomic Analysis (V.D.M., F.K.), São Paulo, Brazil; Department of Neurology (W.M.), University of São Paulo School of Medicine, Ribeirão Preto, Brazil; and Department of Neurology (F.K.), University of São Paulo School of Medicine, São Paulo, Brazil.
Clarissa R R RochaDepartment of Neurology (J.L.P., O.G.P.B., A.S.B.O.), Federal University of São Paulo, São Paulo, Brazil; Department of Microbiology (C.R.R.R., C.F.M.M.), Institute of Biomedical Sciences, and Center for Human Genome and Stem Cell Research (L.I.M.-S., F.K.), Institute of Biosciences, University of São Paulo, São Paulo, Brazil; Mendelics Genomic Analysis (V.D.M., F.K.), São Paulo, Brazil; Department of Neurology (W.M.), University of São Paulo School of Medicine, Ribeirão Preto, Brazil; and Department of Neurology (F.K.), University of São Paulo School of Medicine, São Paulo, Brazil.
Lucia I Macedo-SouzaDepartment of Neurology (J.L.P., O.G.P.B., A.S.B.O.), Federal University of São Paulo, São Paulo, Brazil; Department of Microbiology (C.R.R.R., C.F.M.M.), Institute of Biomedical Sciences, and Center for Human Genome and Stem Cell Research (L.I.M.-S., F.K.), Institute of Biosciences, University of São Paulo, São Paulo, Brazil; Mendelics Genomic Analysis (V.D.M., F.K.), São Paulo, Brazil; Department of Neurology (W.M.), University of São Paulo School of Medicine, Ribeirão Preto, Brazil; and Department of Neurology (F.K.), University of São Paulo School of Medicine, São Paulo, Brazil.
Vitor De MarioDepartment of Neurology (J.L.P., O.G.P.B., A.S.B.O.), Federal University of São Paulo, São Paulo, Brazil; Department of Microbiology (C.R.R.R., C.F.M.M.), Institute of Biomedical Sciences, and Center for Human Genome and Stem Cell Research (L.I.M.-S., F.K.), Institute of Biosciences, University of São Paulo, São Paulo, Brazil; Mendelics Genomic Analysis (V.D.M., F.K.), São Paulo, Brazil; Department of Neurology (W.M.), University of São Paulo School of Medicine, Ribeirão Preto, Brazil; and Department of Neurology (F.K.), University of São Paulo School of Medicine, São Paulo, Brazil.
Wilson MarquesDepartment of Neurology (J.L.P., O.G.P.B., A.S.B.O.), Federal University of São Paulo, São Paulo, Brazil; Department of Microbiology (C.R.R.R., C.F.M.M.), Institute of Biomedical Sciences, and Center for Human Genome and Stem Cell Research (L.I.M.-S., F.K.), Institute of Biosciences, University of São Paulo, São Paulo, Brazil; Mendelics Genomic Analysis (V.D.M., F.K.), São Paulo, Brazil; Department of Neurology (W.M.), University of São Paulo School of Medicine, Ribeirão Preto, Brazil; and Department of Neurology (F.K.), University of São Paulo School of Medicine, São Paulo, Brazil.
Orlando G P BarsottiniDepartment of Neurology (J.L.P., O.G.P.B., A.S.B.O.), Federal University of São Paulo, São Paulo, Brazil; Department of Microbiology (C.R.R.R., C.F.M.M.), Institute of Biomedical Sciences, and Center for Human Genome and Stem Cell Research (L.I.M.-S., F.K.), Institute of Biosciences, University of São Paulo, São Paulo, Brazil; Mendelics Genomic Analysis (V.D.M., F.K.), São Paulo, Brazil; Department of Neurology (W.M.), University of São Paulo School of Medicine, Ribeirão Preto, Brazil; and Department of Neurology (F.K.), University of São Paulo School of Medicine, São Paulo, Brazil.
Acary S Bulle OliveiraDepartment of Neurology (J.L.P., O.G.P.B., A.S.B.O.), Federal University of São Paulo, São Paulo, Brazil; Department of Microbiology (C.R.R.R., C.F.M.M.), Institute of Biomedical Sciences, and Center for Human Genome and Stem Cell Research (L.I.M.-S., F.K.), Institute of Biosciences, University of São Paulo, São Paulo, Brazil; Mendelics Genomic Analysis (V.D.M., F.K.), São Paulo, Brazil; Department of Neurology (W.M.), University of São Paulo School of Medicine, Ribeirão Preto, Brazil; and Department of Neurology (F.K.), University of São Paulo School of Medicine, São Paulo, Brazil.
Carlos F M MenckDepartment of Neurology (J.L.P., O.G.P.B., A.S.B.O.), Federal University of São Paulo, São Paulo, Brazil; Department of Microbiology (C.R.R.R., C.F.M.M.), Institute of Biomedical Sciences, and Center for Human Genome and Stem Cell Research (L.I.M.-S., F.K.), Institute of Biosciences, University of São Paulo, São Paulo, Brazil; Mendelics Genomic Analysis (V.D.M., F.K.), São Paulo, Brazil; Department of Neurology (W.M.), University of São Paulo School of Medicine, Ribeirão Preto, Brazil; and Department of Neurology (F.K.), University of São Paulo School of Medicine, São Paulo, Brazil.
Fernando KokDepartment of Neurology (J.L.P., O.G.P.B., A.S.B.O.), Federal University of São Paulo, São Paulo, Brazil; Department of Microbiology (C.R.R.R., C.F.M.M.), Institute of Biomedical Sciences, and Center for Human Genome and Stem Cell Research (L.I.M.-S., F.K.), Institute of Biosciences, University of São Paulo, São Paulo, Brazil; Mendelics Genomic Analysis (V.D.M., F.K.), São Paulo, Brazil; Department of Neurology (W.M.), University of São Paulo School of Medicine, Ribeirão Preto, Brazil; and Department of Neurology (F.K.), University of São Paulo School of Medicine, São Paulo, Brazil.
Universidade Federal de São Paulo · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

PNKP (polynucleotide kinase 3'-phosphatase, OMIM #605610) product is involved in the repair of strand breaks and base damage in the DNA molecule mainly caused by radical oxygen species. Deleterious variants affecting this gene have been previously associated with microcephaly, epilepsy, and developmental delay.(1) According to a previous report, homozygous loss-of-function substitution in PNKP was associated with cerebellar atrophy, neuropathy, microcephaly, epilepsy, and intellectual disability.(2) Recently, whole-exome sequencing (WES) performed in a cohort of Portuguese families with ataxia with oculomotor apraxia (AOA) disclosed pathogenic variants in PNKP in 11 individuals. Other clinical features in that study included neuropathy, dystonia, cognitive impairment, decreased vibration sense, pyramidal signs, mild elevation in α-fetoprotein, and low levels of albumin. This condition was named AOA type 4 (OMIM #616267), as the phenotype of AOA has been previously associated with 3 other genes: APTX, SETX, and PIK3R5.(3) Altogether, these reports demonstrate the great phenotypic diversity associated with PNKP mutations. In this article, we further enlarge this variability by demonstrating that early-onset axonal sensory-motor neuropathy (or axonal Charcot-Marie-Tooth (CMT) disease) followed years later by ataxia without oculomotor apraxia can be caused by deleterious variants in PNKP. Full consent was obtained from the patient and his parents for this publication. This study was approved by institutional ethics committees.

Identifiers

PMID27066567
PMCPMC4811384
OpenAlexW2292401538

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