ArticleFrontiers in plant science2016
Identification of Arbuscular Mycorrhiza (AM)-Responsive microRNAs in Tomato.
Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.
What it found
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Who cites it
26 citing papers in PubMed, 52 citations in OpenAlex.
- Rice miRNA-mediated trans-kingdom gene regulation in pathogenic and symbiotic fungal interactions.BMC genomics · 2025Article
- Microbial inheritance through seed: a clouded area needs to be enlightened.Archives of microbiology · 2025Review
- Exploring the potential of endophyte-plant interactions for improving crop sustainable yields in a changing climate.Frontiers in plant science · 2024Review
- Endophytes Modulate Plant Genes: Present Status and Future Perspectives.Current microbiology · 2023Review
- MiR-126-Loaded Immunoliposomes against Vascular Endothelial Inflammation In Vitro and Vivo Evaluation.Pharmaceutics · 2023Article
- Dynamic Regulation of Grapevine's microRNAs in Response to Mycorrhizal Symbiosis and High Temperature.Plants (Basel, Switzerland) · 2023Article
- The RNAome landscape of tomato during arbuscular mycorrhizal symbiosis reveals an evolving RNA layer symbiotic regulatory network.Plant communications · 2023Article
- Role of microRNA miR171 in plant development.PeerJ · 2023Review
- Identification of microRNAs responsive to arbuscular mycorrhizal fungi in Panicum virgatum (switchgrass).BMC genomics · 2022Article
- Article
- Function and Regulation of microRNA171 in Plant Stem Cell Homeostasis and Developmental Programing.International journal of molecular sciences · 2022Review
- Bacterial Endophytes: The Hidden Actor in Plant Immune Responses against Biotic Stress.Plants (Basel, Switzerland) · 2021Review
- Article
- Plant miRNA Cross-Kingdom Transfer Targeting Parasitic and Mutualistic Organisms as a Tool to Advance Modern Agriculture.Frontiers in plant science · 2020Review
- In silico analysis of fungal small RNA accumulation reveals putative plant mRNA targets in the symbiosis between an arbuscular mycorrhizal fungus and its host plant.BMC genomics · 2019Article
- Identification ofFrontiers in microbiology · 2019Article
- Article
- Genome-wide comparative analysis in Solanaceous species reveals evolution of microRNAs targeting defense genes in Capsicum spp.DNA research : an international journal for rapid publication of reports on genes and genomes · 2018Article
- Comprehensive transcriptome analysis reveals genes in response to water deficit in the leaves of Saccharum narenga (Nees ex Steud.) hack.BMC plant biology · 2018Article
- Identification of Arbuscular Mycorrhiza Fungi Responsive microRNAs and Their Regulatory Network in Maize.International journal of molecular sciences · 2018Article
Corrections and comments
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Authors and funding
11 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
A majority of land plants can form symbiosis with arbuscular mycorrhizal (AM) fungi. MicroRNAs (miRNAs) have been implicated to regulate this process in legumes, but their involvement in non-legume species is largely unknown. In this study, by performing deep sequencing of sRNA libraries in tomato roots and comparing with tomato genome, a total of 700 potential miRNAs were predicted, among them, 187 are known plant miRNAs that have been previously deposited in miRBase. Unlike the profiles in other plants such as rice and Arabidopsis, a large proportion of predicted tomato miRNAs was 24 nt in length. A similar pattern was observed in the potato genome but not in tobacco, indicating a Solanum genus-specific expansion of 24-nt miRNAs. About 40% identified tomato miRNAs showed significantly altered expressions upon Rhizophagus irregularis inoculation, suggesting the potential roles of these novel miRNAs in AM symbiosis. The differential expression of five known and six novel miRNAs were further validated using qPCR analysis. Interestingly, three up-regulated known tomato miRNAs belong to a known miR171 family, a member of which has been reported in Medicago truncatula to regulate AM symbiosis. Thus, the miR171 family likely regulates AM symbiosis conservatively across different plant lineages. More than 1000 genes targeted by potential AM-responsive miRNAs were provided and their roles in AM symbiosis are worth further exploring.
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