ArticleFrontiers in plant science2016
Genome-Wide Identification of Jatropha curcas Aquaporin Genes and the Comparative Analysis Provides Insights into the Gene Family Expansion and Evolution in Hevea brasiliensis.
Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.
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27 citing papers in PubMed, 76 citations in OpenAlex.
- Comparative analysis of the Aquaporin gene family in Cucurbitaceae: insights into evolutionary patterns and functional diversity.BMC plant biology · 2026Article
- Evolution and stress response potential of the plant splicing factor U1C.Scientific reports · 2024Article
- TIP aquaporins in Cyperus esculentus: genome-wide identification, expression profiles, subcellular localizations, and interaction patterns.BMC plant biology · 2024Article
- Analysis ofPlants (Basel, Switzerland) · 2023Article
- Genome-Wide Analysis of Aquaporin Gene Family inGenes · 2023Article
- The Role of Transmembrane Proteins in Plant Growth, Development, and Stress Responses.International journal of molecular sciences · 2022Review
- Genomic Analysis ofLife (Basel, Switzerland) · 2022Article
- Genomic insights into lineage-specific evolution of the oleosin family in Euphorbiaceae.BMC genomics · 2022Article
- Genome-Wide Identification and Comparative Analysis ofFrontiers in genetics · 2022Article
- Genome-Wide Identification, Structure Characterization, and Expression Pattern Profiling of the Aquaporin Gene Family inInternational journal of molecular sciences · 2021Article
- Genome-Wide Identification and Function of Aquaporin Genes During Dormancy and Sprouting Periods of Kernel-Using Apricot (Frontiers in plant science · 2021Article
- Genome Wild Analysis and Molecular Understanding of the Aquaporin Diversity in Olive Trees (International journal of molecular sciences · 2020Article
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- Genome-wide identification, structure characterization, and expression pattern profiling of aquaporin gene family in cucumber.BMC plant biology · 2019Article
- Genome-wide comparison reveals divergence of cassava and rubber aquaporin family genes after the recent whole-genome duplication.BMC genomics · 2019Article
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- Genome-Wide Identification and Characterization of the JAZ Gene Family in Rubber Tree (Frontiers in genetics · 2019Article
- Genome-Wide Identification and Characterization of Aquaporins and Their Role in the Flower Opening Processes in Carnation (Molecules (Basel, Switzerland) · 2018Article
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8 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Aquaporins (AQPs) are channel-forming integral membrane proteins that transport water and other small solutes across biological membranes. Despite the vital role of AQPs, to date, little is known in physic nut (Jatropha curcas L., Euphorbiaceae), an important non-edible oilseed crop with great potential for the production of biodiesel. In this study, 32 AQP genes were identified from the physic nut genome and the family number is relatively small in comparison to 51 in another Euphorbiaceae plant, rubber tree (Hevea brasiliensis Muell. Arg.). Based on the phylogenetic analysis, the JcAQPs were assigned to five subfamilies, i.e., nine plasma membrane intrinsic proteins (PIPs), nine tonoplast intrinsic proteins (TIPs), eight NOD26-like intrinsic proteins (NIPs), two X intrinsic proteins (XIPs), and four small basic intrinsic proteins (SIPs). Like rubber tree and other plant species, functional prediction based on the aromatic/arginine selectivity filter, Froger's positions, and specificity-determining positions showed a remarkable difference in substrate specificity among subfamilies of JcAQPs. Genome-wide comparative analysis revealed the specific expansion of PIP and TIP subfamilies in rubber tree and the specific gene loss of the XIP subfamily in physic nut. Furthermore, by analyzing deep transcriptome sequencing data, the expression evolution especially the expression divergence of duplicated HbAQP genes was also investigated and discussed. Results obtained from this study not only provide valuable information for future functional analysis and utilization of Jc/HbAQP genes, but also provide a useful reference to survey the gene family expansion and evolution in Euphorbiaceae plants and other plant species.
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