Evidence map›Paper›PMID 27065061›Full record

ArticleBiochemistry2016

ApoE: In Vitro Studies of a Small Molecule Effector.

Tridib Mondal, Hanliu Wang, Gregory T DeKoster, Berevan Baban, Michael L Gross, Carl Frieden

Abstract read
In one paragraph

Article in Biochemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. A mechanism for lipid binding to apoE and the role of intrinsically disordered regions coupled to domain-domain interactions.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  11. Helical structure, stability, and dynamics in human apolipoprotein E3 and E4 by hydrogen exchange and mass spectrometry.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Tridib MondalDepartment of Biochemistry and Molecular Biophysics, Washington University School of Medicine , 660 S. Euclid Avenue, St. Louis, Missouri 63110, United States.
Hanliu WangDepartment of Chemistry, Washington University , One Brookings Drive, St. Louis, Missouri 63130, United States.
Gregory T DeKosterDepartment of Biochemistry and Molecular Biophysics, Washington University School of Medicine , 660 S. Euclid Avenue, St. Louis, Missouri 63110, United States.
Berevan BabanDepartment of Biochemistry and Molecular Biophysics, Washington University School of Medicine , 660 S. Euclid Avenue, St. Louis, Missouri 63110, United States.
Michael L GrossDepartment of Chemistry, Washington University , One Brookings Drive, St. Louis, Missouri 63130, United States.
Carl FriedenDepartment of Biochemistry and Molecular Biophysics, Washington University School of Medicine , 660 S. Euclid Avenue, St. Louis, Missouri 63110, United States.
Washington University in St. Louis · US

Funding

TrainingP41GM103422 · NIGMS · WASHINGTON UNIVERSITY · PI YARASHESKI, KEVIN E · 2012 to 2019
$12.0M
ALZHEIMER'S DISEASE: DEFINING THE APOE-AMYLOID-BETA INTERACTIONRF1AG044331 · NIA · WASHINGTON UNIVERSITY · PI FRIEDEN, CARL · 2014 to 2014
$1.6M
NIA NIH HHS RF1 AG044331NIGMS NIH HHS P41 GM103422
6 · The paper itself

Abstract

Apolipoprotein E4 (apoE4), one of three isoforms of apoE, is the major risk factor for developing late onset Alzheimer's disease. The only differences among these isoforms (apoE2, apoE3, and apoE4) are single amino acid changes. Yet these proteins are functionally very different. One approach to ameliorating the effect of apoE4 with respect to Alzheimer's disease would be to find small molecular weight compounds that affect the behavior of apoE4. Few studies of this approach have been carried out in part because there was no complete structure of any full-length apoE isoform until 2011. Here, we focus on one small molecular weight compound, EZ-482, and explore the effects of its binding to apoE. Using hydrogen-deuterium exchange, we determined that EZ-482 binds to the C-terminal domains of both apoE3 and apoE4. The binding to apoE4, however, is accompanied by a unique N-terminal allosteric effect. Using fluorescence methods, we determined an apparent dissociation constant of approximately 8 μM. Although EZ-482 binds to the C-terminal domain, it blocks heparin binding to the N-terminal domain. The residues of apoE that bind heparin are the same as those involved in apoE binding to LDL and LRP-1 receptors. The methods and the data presented here may serve as a template for future studies using small molecular weight compounds to modulate the behavior of apoE.

Indexed as

Alzheimer DiseaseApolipoprotein E4Deuterium Exchange MeasurementHeparinHumansLipoproteins, LDLProtein DomainsProtein IsoformsReceptors, LDLApolipoprotein E4HeparinLipoproteins, LDLProtein IsoformsReceptors, LDL

Identifiers

PMID27065061
PMCPMC4976638
OpenAlexW2317095516

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.