Evidence map›Paper›PMID 27064363›Full record

ArticleLeukemia research2016

Histone deacetylase inhibitors decrease NHEJ both by acetylation of repair factors and trapping of PARP1 at DNA double-strand breaks in chromatin.

Carine Robert, Pratik K Nagaria, Nisha Pawar, Adeoluwa Adewuyi, Ivana Gojo, David J Meyers, Philip A Cole, Feyruz V Rassool

Open access · greenAbstract read
In one paragraph

Article in Leukemia research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
3.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 107 citations in OpenAlex.

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  12. A Bifunctional PARP-HDAC Inhibitor with Activity in Ewing Sarcoma.Clinical cancer research : an official journal of the American Association for Cancer Research · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Carine RobertDepartment of Radiation Oncology, University of Maryland School of Medicine, Baltimore, MD 21201, United States.
Pratik K NagariaDepartment of Radiation Oncology, University of Maryland School of Medicine, Baltimore, MD 21201, United States.
Nisha PawarDepartment of Radiation Oncology, University of Maryland School of Medicine, Baltimore, MD 21201, United States.
Adeoluwa AdewuyiDepartment of Radiation Oncology, University of Maryland School of Medicine, Baltimore, MD 21201, United States.
Ivana GojoThe Sidney Kimmel Comprehensive Cancer Center, School of Medicine, Johns Hopkins University, United States.
David J MeyersDepartment of Pharmacology and Molecular Sciences, Johns Hopkins University School of Medicine, Baltimore, MD 21205, United States.
Philip A ColeDepartment of Pharmacology and Molecular Sciences, Johns Hopkins University School of Medicine, Baltimore, MD 21205, United States.
Feyruz V RassoolDepartment of Radiation Oncology, University of Maryland School of Medicine, Baltimore, MD 21201, United States. Electronic address: frassool@som.umaryland.edu.
University of Maryland, Baltimore · USJohns Hopkins University · USJohns Hopkins Medicine · US

Funding

Protein Acylation and Methylation Mechanisms_Administrative SupplementR37GM062437 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI COLE, PHILIP A · 2013 to 2022
$4.1M
Mechanisms &Inhibition of Histone AcetyltransferasesR01GM062437 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI COLE, PHILIP A · 2001 to 2012
$3.8M
Mechanisms for sensitivity to PARP inhibitors in cancers involving ALT NHEJR21CA186974 · NCI · UNIVERSITY OF MARYLAND BALTIMORE · PI RASSOOL, FEYRUZ VIRGILIA · 2015 to 2016
$367k
NCI NIH HHS R21 CA186974NIGMS NIH HHS R01 GM062437NIGMS NIH HHS R37 GM062437
6 · The paper itself

Abstract

Histone deacetylase inhibitors (HDACi) induce acetylation of histone and non-histone proteins, and modulate the acetylation of proteins involved in DNA double-strand break (DSB) repair. Non-homologous end-joining (NHEJ) is one of the main pathways for repairing DSBs. Decreased NHEJ activity has been reported with HDACi treatment. However, mechanisms through which these effects are regulated in the context of chromatin are unclear. We show that pan-HDACi, trichostatin A (TSA), causes differential acetylation of DNA repair factors Ku70/Ku80 and poly ADP-ribose polymerase-1 (PARP1), and impairs NHEJ. Repair effects are reversed by treatments with p300/CBP inhibitor C646, with significantly decreased acetylation of PARP1. In keeping with these findings, TSA treatment significantly increases PARP1 binding to DSBs in chromatin. Notably, AML patients treated with HDACi entinostat (MS275) in vivo also show increased formation of poly ADP-ribose (PAR) that co-localizes with DSBs. Further, we demonstrate that PARP1 bound to chromatin increases with duration of TSA exposure, resembling PARP "trapping". Knockdown of PARP1 inhibits trapping and mitigates HDACi effects on NHEJ. Finally, combination of HDACi with potent PARP inhibitor talazoparib (BMN673) shows a dose-dependent increase in PARP "trapping", which correlates with increased apoptosis. These results provide a mechanism through which HDACi inhibits deacetylation and increases binding of PARP1 to DSBs, leading to decreased NHEJ and cytotoxicity of leukemia cells.

Indexed as

AcetylationBenzamidesChromatinDNA Breaks, Double-StrandedDNA End-Joining RepairHistone Deacetylase InhibitorsHumansKu AutoantigenLeukemia, Myeloid, AcutePoly (ADP-Ribose) Polymerase-1PyridinesTumor Cells, CulturedBenzamidesChromatinentinostatHistone Deacetylase InhibitorsKu AutoantigenPoly (ADP-Ribose) Polymerase-1PyridinesDSB repairHDACNHEJPARP1

Identifiers

PMID27064363
PMCPMC5007632
OpenAlexW2313302556

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.