Evidence map›Paper›PMID 27064270›Full record

ArticleFrontiers in plant science2016

Photosystem II Repair and Plant Immunity: Lessons Learned from Arabidopsis Mutant Lacking the THYLAKOID LUMEN PROTEIN 18.3.

Sari Järvi, Janne Isojärvi, Saijaliisa Kangasjärvi, Jarkko Salojärvi, Fikret Mamedov, Marjaana Suorsa, Eva-Mari Aro

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 28 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
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  8. Systemic Signaling: A Role in Propelling Crop Yield.Plants (Basel, Switzerland) · 2022
    Review
  9. Review
  10. A Novel, Small Cysteine-Rich Effector, RsSCR10 inFrontiers in microbiology · 2021
    Article
  11. Oxygen and ROS in Photosynthesis.Plants (Basel, Switzerland) · 2020
    Review
  12. Review
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Sari JärviMolecular Plant Biology, Department of Biochemistry, University of Turku Turku, Finland.
Janne IsojärviMolecular Plant Biology, Department of Biochemistry, University of Turku Turku, Finland.
Saijaliisa KangasjärviMolecular Plant Biology, Department of Biochemistry, University of Turku Turku, Finland.
Jarkko SalojärviPlant Biology, Department of Biosciences, University of Helsinki Helsinki, Finland.
Fikret MamedovMolecular Biomimetics, Department of Chemistry-Ångström Laboratory, Uppsala University Uppsala, Sweden.
Marjaana SuorsaMolecular Plant Biology, Department of Biochemistry, University of Turku Turku, Finland.
Eva-Mari AroMolecular Plant Biology, Department of Biochemistry, University of Turku Turku, Finland.
University of Turku · FIUniversity of Helsinki · FIUppsala University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chloroplasts play an important role in the cellular sensing of abiotic and biotic stress. Signals originating from photosynthetic light reactions, in the form of redox and pH changes, accumulation of reactive oxygen and electrophile species or stromal metabolites are of key importance in chloroplast retrograde signaling. These signals initiate plant acclimation responses to both abiotic and biotic stresses. To reveal the molecular responses activated by rapid fluctuations in growth light intensity, gene expression analysis was performed with Arabidopsis thaliana wild type and the tlp18.3 mutant plants, the latter showing a stunted growth phenotype under fluctuating light conditions (Biochem. J, 406, 415-425). Expression pattern of genes encoding components of the photosynthetic electron transfer chain did not differ between fluctuating and constant light conditions, neither in wild type nor in tlp18.3 plants, and the composition of the thylakoid membrane protein complexes likewise remained unchanged. Nevertheless, the fluctuating light conditions repressed in wild-type plants a broad spectrum of genes involved in immune responses, which likely resulted from shade-avoidance responses and their intermixing with hormonal signaling. On the contrary, in the tlp18.3 mutant plants there was an imperfect repression of defense-related transcripts upon growth under fluctuating light, possibly by signals originating from minor malfunction of the photosystem II (PSII) repair cycle, which directly or indirectly modulated the transcript abundances of genes related to light perception via phytochromes. Consequently, a strong allocation of resources to defense reactions in the tlp18.3 mutant plants presumably results in the stunted growth phenotype under fluctuating light.

Indexed as

Arabidopsis thalianadefensephotosynthesisphotosystem II repair cyclethylakoid lumentranscriptomics

Identifiers

PMID27064270
PMCPMC4814454
OpenAlexW2325611863

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.