Evidence map›Paper›PMID 27061608›Full record

ArticleCytometry. Part A : the journal of the International Society for Analytical Cytology2016

Heparin reduces nonspecific eosinophil staining artifacts in mass cytometry experiments.

Adeeb H Rahman, Leticia Tordesillas, M Cecilia Berin

Open access · greenAbstract read
In one paragraph

Article in Cytometry. Part A : the journal of the International Society for Analytical Cytology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 73 citations in OpenAlex.

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  17. Observational
  18. CyTOFFrontiers in immunology · 2022
    Review
  19. Article
  20. A streamlined whole blood CyTOF workflow defines a circulating immune cell signature of COVID-19.Cytometry. Part A : the journal of the International Society for Analytical Cytology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Adeeb H RahmanHuman Immune Monitoring CoRE, Icahn School of Medicine at Mount Sinai, New York, New York, 10029.
Leticia TordesillasImmunology Institute, Icahn School of Medicine at Mount Sinai, New York, New York, 10029.
M Cecilia BerinImmunology Institute, Icahn School of Medicine at Mount Sinai, New York, New York, 10029.
Icahn School of Medicine at Mount Sinai · US

Funding

Novel tools to maximize profiling of tissue and antigen specific immune dysregulation in allergy and inflammatory bowel disesaseU24AI118644 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI BERIN, CECILIA, MERAD, MIRIAM · 2015 to 2020
$2.4M
NIAID NIH HHS U24 AI118644
6 · The paper itself

Abstract

The analysis of heterogeneous cell samples by mass cytometry (CyTOF) relies on the assumption that metal labeled antibodies accurately bind to their target antigens. We report a previously unappreciated experimental artifact of non-specific antibody binding by eosinophils during intracellular CyTOF analysis of human whole blood samples. We hypothesized that this non-specific binding results from a charge-based interaction between the metal-labeled antibodies and highly cationic proteins found in eosinophillic granules and found that this non-specific staining artifact could be reduced to background levels with a simple blocking protocol using heparin as a competing anionic protein. This protocol eliminates a potential source of erroneous data interpretation in all experiments involving intracellular staining of human whole blood samples, and allows accurate assessment of dynamic changes in intracellular proteins in eosinophils by CyTOF. © 2016 International Society for Advancement of Cytometry.

Indexed as

AntibodiesAntigensArtifactsBinding, CompetitiveChildCytoplasmic GranulesEosinophil Cationic ProteinEosinophilsFlow CytometryHeparinHumansMass SpectrometryPrimary Cell CultureProtein BindingStaining and LabelingAntibodiesAntigensEosinophil Cationic ProteinHeparinCyTOFeosinophilgranulocyteheparinmass cytometrynonspecific antibody bindingwhole blood

Identifiers

PMID27061608
PMCPMC4919163
OpenAlexW2340128484

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.