Evidence map›Paper›PMID 27058937›Full record

ArticleCell stem cell2016

Dclk1 Defines Quiescent Pancreatic Progenitors that Promote Injury-Induced Regeneration and Tumorigenesis.

C Benedikt Westphalen, Yoshihiro Takemoto, Takayuki Tanaka, Marina Macchini, Zhengyu Jiang, Bernhard W Renz, Xiaowei Chen, Steffen Ormanns, Karan Nagar, Yagnesh Tailor and 19 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell stem cell, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 140 papers.

0numbers the graph read from it
0cells of the map it votes in
140citing papers in PubMed
11.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

140 citing papers in PubMed, 228 citations in OpenAlex.

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  20. Review

80 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

29 authors at 7 institutions in 3 countries.

C Benedikt WestphalenDepartment of Internal Medicine III, Hospital of the University of Munich D-81377, Munich, Germany; Department of Digestive and Liver Diseases, Columbia University Medical Center, New York, NY 10032, USA.
Yoshihiro TakemotoDepartment of Digestive and Liver Diseases, Columbia University Medical Center, New York, NY 10032, USA.
Takayuki TanakaDepartment of Digestive and Liver Diseases, Columbia University Medical Center, New York, NY 10032, USA.
Marina MacchiniDepartment of Digestive and Liver Diseases, Columbia University Medical Center, New York, NY 10032, USA; Department of Experimental, Diagnostic and Specialty Medicine, Bologna University, 40128 Bologna, Italy.
Zhengyu JiangDepartment of Digestive and Liver Diseases, Columbia University Medical Center, New York, NY 10032, USA.
Bernhard W RenzDepartment of General, Visceral, Transplantation, Vascular and Thoracic Surgery, Hospital of the University of Munich D-81377, Munich, Germany; Department of Digestive and Liver Diseases, Columbia University Medical Center, New York, NY 10032, USA.
Xiaowei ChenDepartment of Digestive and Liver Diseases, Columbia University Medical Center, New York, NY 10032, USA.
Steffen OrmannsDepartment of Pathology, Hospital of the University of Munich D-81377, Munich, Germany.
Karan NagarDepartment of Digestive and Liver Diseases, Columbia University Medical Center, New York, NY 10032, USA.
Yagnesh TailorDepartment of Digestive and Liver Diseases, Columbia University Medical Center, New York, NY 10032, USA.
Randal MayDepartment of Digestive Diseases and Nutrition, University of Oklahoma, Oklahoma City, OK 73104, USA.
Youngjin ChoDepartment of Pharmacology, Columbia University Medical Center, New York, NY 10032, USA.
Samuel AsfahaDepartment of Digestive and Liver Diseases, Columbia University Medical Center, New York, NY 10032, USA.
Daniel L WorthleyDepartment of Digestive and Liver Diseases, Columbia University Medical Center, New York, NY 10032, USA.
Yoku HayakawaDepartment of Digestive and Liver Diseases, Columbia University Medical Center, New York, NY 10032, USA.
Aleksandra M UrbanskaDepartment of Digestive and Liver Diseases, Columbia University Medical Center, New York, NY 10032, USA.
Michael QuanteDepartment of Internal Medicine II, Klinikum rechts der Isar II, Technische Universität München, D-81675 Munich, Germany.
Maximilian ReichertDepartment of Internal Medicine II, Klinikum rechts der Isar II, Technische Universität München, D-81675 Munich, Germany; Division of Gastroenterology, Department of Medicine, Abramson Cancer Center, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA.
Joshua BroydeDepartment of Systems Biology, Columbia University Medical Center, New York, NY 10032, USA.
Prem S SubramaniamDepartment of Systems Biology, Columbia University Medical Center, New York, NY 10032, USA.
Helen RemottiDepartment of Pathology and Cell Biology, Columbia University Medical Center, New York, NY 10032, USA.
Gloria H SuDepartment of Pathology and Cell Biology, Columbia University Medical Center, New York, NY 10032, USA; Department of Otolaryngology / Head & Neck Surgery, Columbia University Medical Center, New York, NY 10032, USA.
Anil K RustgiDivision of Gastroenterology, Department of Medicine, Abramson Cancer Center, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA.
Richard A FriedmanDepartment of Pathology and Cell Biology, Columbia University Medical Center, New York, NY 10032, USA; Department of Biomedical Informatics, Columbia University Medical Center, New York, NY 10032, USA.
Barry HonigDepartment of Pharmacology, Columbia University Medical Center, New York, NY 10032, USA.
Andrea CalifanoDepartment of Pathology and Cell Biology, Columbia University Medical Center, New York, NY 10032, USA; Department of Otolaryngology / Head & Neck Surgery, Columbia University Medical Center, New York, NY 10032, USA; Department of Biomedical Informatics, Columbia University Medical Center, New York, NY 10032, USA; Department of Systems Biology, Columbia University Medical Center, New York, NY 10032, USA; Department of Biochemistry and Molecular Biophysics, Columbia University Medical Center, New York, NY 10032, USA; Institute for Cancer Genetics, Columbia University, New York, NY 10032, USA; Center for Computational Biology and Bioinformatics (C2B2), Columbia University, New York, NY 10032, USA; Herbert Irving Comprehensive Cancer Center, Columbia University Medical Center, New York, NY 10032, USA.
Courtney W HouchenDepartment of Digestive Diseases and Nutrition, University of Oklahoma, Oklahoma City, OK 73104, USA.
Kenneth P OliveDepartment of Digestive and Liver Diseases, Columbia University Medical Center, New York, NY 10032, USA; Department of Pathology and Cell Biology, Columbia University Medical Center, New York, NY 10032, USA; Herbert Irving Comprehensive Cancer Center, Columbia University Medical Center, New York, NY 10032, USA.
Timothy C WangDepartment of Digestive and Liver Diseases, Columbia University Medical Center, New York, NY 10032, USA; Herbert Irving Comprehensive Cancer Center, Columbia University Medical Center, New York, NY 10032, USA. Electronic address: tcw21@columbia.edu.
Columbia University Irving Medical Center · USUniversity of Oklahoma Health Sciences Center · USKlinikum rechts der Isar · DELudwig-Maximilians-Universität München · DETechnical University of Munich · DEUniversity of Bologna · ITUniversity of Pennsylvania · US

Funding

Predicting Cancer Cell Response to Endogenous and Exogenous Perturbations at the Single Cell LevelR35CA197745 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ANDREA CALIFANO · 2015 to 2026
$11.5M
The Prrx-1 transcription factor in pancreatic ductal biologyR01DK060694 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI CHANDWANI, ROHIT, RUSTGI, ANIL K · 2002 to 2025
$8.3M
Systems Biology of Tumor Progression and Drug ResistanceU01CA168426 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI CALIFANO, ANDREA · 2012 to 2016
$6.5M
COMPUTER STUDIES OF PROTEIN STRUCTURE AND FUNCTIONR01GM030518 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI HONIG, BARRY H · 1985 to 2020
$4.5M
Mouse Model for Human Pancreatic Ductal AdenocarcinomaR01CA109525 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI SU, GLORIA HUEI-TING · 2004 to 2015
$2.6M
High-performance compute cluster for biomedical computingS10OD012351 · OD · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI CALIFANO, ANDREA · 2012 to 2012
$2.0M
COMPUTER STUDIES OF PROTEIN STRUCTURE AND FUNCTIONR37GM030518 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI HONIG, BARRY H · 1995 to 2004
$1.5M
Training Program in Computational BiologyT32GM082797 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI HONIG, BARRY H · 2008 to 2015
$1.4M
Quiescent Dclk1+ stem cells in the mouse intestineR01DK097016 · NIDDK · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI WANG, TIMOTHY CRAGIN · 2013 to 2015
$950k
Storage System for High Performance ComputingS10OD021764 · OD · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI CALIFANO, ANDREA · 2016 to 2016
$600k
CIHRHoward Hughes Medical InstituteNCI NIH HHS R01 CA109525NCI NIH HHS R35 CA197745NCI NIH HHS U01 CA168426NCI NIH HHS U01CA168426NIDDK NIH HHS R01 DK060694NIDDK NIH HHS R01 DK097016NIGMS NIH HHS GM30518NIGMS NIH HHS R01 GM030518NIGMS NIH HHS R37 GM030518NIGMS NIH HHS T32 GM082797NIH HHS S10 OD012351NIH HHS S10 OD021764
6 · The paper itself

Abstract

The existence of adult pancreatic progenitor cells has been debated. While some favor the concept of facultative progenitors involved in homeostasis and repair, neither a location nor markers for such cells have been defined. Using genetic lineage tracing, we show that Doublecortin-like kinase-1 (Dclk1) labels a rare population of long-lived, quiescent pancreatic cells. In vitro, Dclk1+ cells proliferate readily and sustain pancreatic organoid growth. In vivo, Dclk1+ cells are necessary for pancreatic regeneration following injury and chronic inflammation. Accordingly, their loss has detrimental effects after cerulein-induced pancreatitis. Expression of mutant Kras in Dclk1+ cells does not affect their quiescence or longevity. However, experimental pancreatitis converts Kras mutant Dclk1+ cells into potent cancer-initiating cells. As a potential effector of Kras, Dclk1 contributes functionally to the pathogenesis of pancreatic cancer. Taken together, these observations indicate that Dclk1 marks quiescent pancreatic progenitors that are candidates for the origin of pancreatic cancer.

Indexed as

Administration, OralAnimalsCarcinogenesisCarcinoma, Pancreatic DuctalCell ProliferationDoublecortin-Like KinasesMiceOrganoidsPancreatic NeoplasmsPancreatitisProtein Serine-Threonine KinasesTamoxifenDclk1 protein, mouseDoublecortin-Like KinasesProtein Serine-Threonine KinasesTamoxifen

Identifiers

PMID27058937
PMCPMC4826481
OpenAlexW2325887197

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.