Evidence map›Paper›PMID 27058537›Full record

ArticleInternational journal of molecular sciences2016

UPLC-MS/MS-Based Profiling of Eicosanoids in RAW264.7 Cells Treated with Lipopolysaccharide.

Jae Won Lee, Hyuck Jun Mok, Dae-Young Lee, Seung Cheol Park, Myeong Soon Ban, Jehun Choi, Chun Geon Park, Young-Sup Ahn, Kwang Pyo Kim, Hyung Don Kim

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Comparative Lipidomic Analysis of Extracellular Vesicles Derived fromInternational journal of molecular sciences · 2020
    Article
  7. Review
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Jae Won LeeDepartment of Herbal Crop Research, National Institute of Horticultural and Herbal Science, RDA, Eumseong 369-873, Korea. jaewon3@gmail.com.
Hyuck Jun MokDepartment of Applied Chemistry, The Institute of Natural Science, College of Applied Science, Kyung Hee University, Yongin 446-701, Korea. hjmok@khu.ac.kr.
Dae-Young LeeDepartment of Herbal Crop Research, National Institute of Horticultural and Herbal Science, RDA, Eumseong 369-873, Korea. dylee0809@korea.kr.
Seung Cheol ParkDepartment of Applied Chemistry, The Institute of Natural Science, College of Applied Science, Kyung Hee University, Yongin 446-701, Korea. scpark1126@khu.ac.kr.
Myeong Soon BanDepartment of Herbal Crop Research, National Institute of Horticultural and Herbal Science, RDA, Eumseong 369-873, Korea. bms928@nate.com.
Jehun ChoiDepartment of Herbal Crop Research, National Institute of Horticultural and Herbal Science, RDA, Eumseong 369-873, Korea. jehun@korea.kr.
Chun Geon ParkDepartment of Herbal Crop Research, National Institute of Horticultural and Herbal Science, RDA, Eumseong 369-873, Korea. pcg@korea.kr.
Young-Sup AhnDepartment of Herbal Crop Research, National Institute of Horticultural and Herbal Science, RDA, Eumseong 369-873, Korea. ay21cay@korea.kr.
Kwang Pyo KimDepartment of Applied Chemistry, The Institute of Natural Science, College of Applied Science, Kyung Hee University, Yongin 446-701, Korea. kimkp@khu.ac.kr.
Hyung Don KimDepartment of Herbal Crop Research, National Institute of Horticultural and Herbal Science, RDA, Eumseong 369-873, Korea. khd0303@rda.go.kr.
Rural Development Administration · KRKyung Hee University · KRChungbuk National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

While both the pro- and anti-inflammatory effects of several eicosanoids have been widely studied, the degree of inflammation in cells that results from various eicosanoids has yet to be comprehensively studied. The objective of this study was to assess the effect of lipopolysaccharide (LPS) treatment on eicosanoid content in RAW264.7 cells. An Ultra performance liquid chromatography coupled to tandem mass spectrometry (UPLC-MS/MS)-based profiling method was used to analyze the eicosanoid contents of RAW264.7 cells treated with different LPS concentrations. The profiling data were subjected to statistical analyses, such as principal component analysis (PCA) and hierarchical clustering analysis. LPS treatment increased nitric oxide production and secretion of pro-inflammatory cytokines, such as tumor necrosis factor-α and interleukin-6, in a concentration-dependent manner. In total, 79 eicosanoids were identified in the cells. RAW264.7 cells treated with different LPS concentrations were well differentiated in the PCA score plot. A heatmap was used to identify the eicosanoids that were up- or down-regulated according to the degree of inflammation and LPS concentration. Thirty-nine eicosanoids were upregulated and seven were down-regulated by LPS treatment in a concentration-dependent manner. Our novel UPLC-MS/MS technique can profile eicosanoids, and can evaluate the correlations between inflammation and eicosanoid metabolism.

Indexed as

AnimalsChromatography, High Pressure LiquidEicosanoidsInflammationInterleukin-6LipopolysaccharidesMacrophagesMiceNitric OxideRAW 264.7 CellsTandem Mass SpectrometryTumor Necrosis Factor-alphaEicosanoidsInterleukin-6LipopolysaccharidesNitric OxideTumor Necrosis Factor-alphaeicosanoidsinflammationlipopolysaccharidemacrophageUPLC-MS/MS

Identifiers

PMID27058537
PMCPMC4848964
OpenAlexW2314682872

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.