Evidence map›Paper›PMID 27056640›Full record

ArticleLab on a chip2016

On-chip microtubule gliding assay for parallel measurement of tau protein species.

Subhathirai Subramaniyan Parimalam, Mehmet C Tarhan, Stanislav L Karsten, Hiroyuki Fujita, Hirofumi Shintaku, Hidetoshi Kotera, Ryuji Yokokawa

Open access · hybridAbstract readComparative Study
In one paragraph

Article in Lab on a chip, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Subhathirai Subramaniyan ParimalamDepartment of Micro Engineering, Kyoto University, Kyoto, Japan. ryuji@me.kyoto-u.ac.jp.
Mehmet C TarhanLaboratory for Integrated Micro Mechatronic Systems (LIMMS), Institute of Industrial Science (IIS), The University of Tokyo, Tokyo, Japan and Center for International Research on Micronano Mechatronics (CIRMM), Institute of Industrial Science (IIS), The University of Tokyo, Japan.
Stanislav L KarstenCenter for International Research on Micronano Mechatronics (CIRMM), Institute of Industrial Science (IIS), The University of Tokyo, Japan and NeuroInDx Inc., Signal Hill, CA, USA.
Hiroyuki FujitaCenter for International Research on Micronano Mechatronics (CIRMM), Institute of Industrial Science (IIS), The University of Tokyo, Japan.
Hirofumi ShintakuDepartment of Micro Engineering, Kyoto University, Kyoto, Japan. ryuji@me.kyoto-u.ac.jp.
Hidetoshi KoteraDepartment of Micro Engineering, Kyoto University, Kyoto, Japan. ryuji@me.kyoto-u.ac.jp.
Ryuji YokokawaDepartment of Micro Engineering, Kyoto University, Kyoto, Japan. ryuji@me.kyoto-u.ac.jp.
Kyoto University · JPThe University of Tokyo · JP

Funding

Low-cost microdissection system for live brain cell collection (CTAS-Live)R44MH091909 · NIMH · NEUROINDX INC. · PI KARSTEN, STANISLAV · 2013 to 2015
$1.6M
NIMH NIH HHS R44 MH091909
6 · The paper itself

Abstract

Tau protein is a well-established biomarker for a group of neurodegenerative diseases collectively called tauopathies. So far, clinically relevant detection of tau species in cerebrospinal fluid (CSF) cannot be achieved without immunological methods. Recently, it was shown that different tau isoforms including the ones carrying various types of mutations affect microtubule (MT)-kinesin binding and velocity in an isoform specific manner. Here, based on these observations, we developed a microfluidic device to analyze tau mutations, isoforms and their ratios. The assay device consists of three regions: a MT reservoir which captures MTs from a solution to a kinesin-coated surface, a microchannel which guides gliding MTs, and an arrowhead-shaped collector which concentrates MTs. Tau-bound fluorescently labeled MTs (tau-MTs) were assayed, and the increase in fluorescence intensity (FI) corresponding to the total number of MTs accumulated was measured at the collector. We show that our device is capable of differentiating 3R and 4R tau isoform ratios and effects of point mutations within 5 minutes. Furthermore, radially oriented collector regions enable simultaneous FI measurements for six independent assays. Performing parallel assays in the proposed device with minimal image processing provides a cost-efficient, easy-to-use and fast tau detection platform.

Indexed as

Lab-On-A-Chip DevicesModels, BiologicalEnzymes, ImmobilizedEquipment DesignFluorescent DyesHydrophobic and Hydrophilic InteractionsImage Processing, Computer-AssistedKinesinsKineticsLimit of DetectionMicroscopy, FluorescenceMicrotubulesMutationPaclitaxelProtein IsoformsProtein MultimerizationEnzymes, ImmobilizedFluorescent DyesKinesinsPaclitaxelProtein IsoformsProtein SubunitsRecombinant Proteinstau ProteinsTubulin Modulators

Identifiers

PMID27056640
PMCPMC11377082
OpenAlexW2307286284

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.