Evidence map›Paper›PMID 27056217›Full record

ArticleGenome announcements2016

Draft Genome Sequence of Tepidibacillus decaturensis Strain Z9, an Anaerobic, Moderately Thermophilic, and Heterotrophic Bacterium from the Deep Subsurface of the Illinois Basin, USA.

Yiran Dong, Yun-Juan Chang, Robert A Sanford, Bruce W Fouke

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Genome announcements, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Yiran DongEnergy Biosciences Institute, University of Illinois, Urbana-Champaign, Illinois, USA Department of Geology, University of Illinois, Urbana-Champaign, Illinois, USA Carl R. Woese Institute for Genomic Biology, University of Illinois, Urbana-Champaign, Illinois, USA dong5600@illinois.edu.
Yun-Juan ChangRoy J. Carver Biotechnology Center, University of Illinois, Urbana-Champaign, Illinois, USA High Performance and Research Computing, Office of Information Technology, Rutgers University, New Brunswick, New Jersey, USA.
Robert A SanfordDepartment of Geology, University of Illinois, Urbana-Champaign, Illinois, USA.
Bruce W FoukeEnergy Biosciences Institute, University of Illinois, Urbana-Champaign, Illinois, USA Department of Geology, University of Illinois, Urbana-Champaign, Illinois, USA Carl R. Woese Institute for Genomic Biology, University of Illinois, Urbana-Champaign, Illinois, USA Roy J. Carver Biotechnology Center, University of Illinois, Urbana-Champaign, Illinois, USA Department of Microbiology, University of Illinois, Urbana-Champaign, Illinois, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genome of the moderately thermophilic and halotolerant bacteriumTepidibacillus decaturensisstrain Z9 was sequenced. The draft genome comprises three scaffolds, for a total of 2.95 Mb. As the first sequenced genome within the genusTepidibacillus, 2,895 protein-coding genes, 52 tRNA genes, and 3 rRNA operons were predicted.

Identifiers

PMID27056217
PMCPMC4824250

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.