ArticleNature biotechnology2016
Compressive mapping for next-generation sequencing.
Article in Nature biotechnology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
21 citing papers in PubMed.
- SDrecall: a sensitive approach for variant detection in segmental duplications.Genome biology · 2026Article
- Taming large-scale genomic analyses via sparsified genomics.Nature communications · 2025Article
- Article
- Mora: abundance aware metagenomic read re-assignment for disentangling similar strains.BMC bioinformatics · 2024Article
- A compressive seeding algorithm in conjunction with reordering-based compression.Bioinformatics (Oxford, England) · 2024Article
- Efficient mapping of accurate long reads in minimizer space with mapquik.Genome research · 2023Article
- Navigating bottlenecks and trade-offs in genomic data analysis.Nature reviews. Genetics · 2023Review
- Minimizer-space de Bruijn graphs: Whole-genome assembly of long reads in minutes on a personal computer.Cell systems · 2021Article
- A Python-based programming language for high-performance computational genomics.Nature biotechnology · 2021Article
- Technology dictates algorithms: recent developments in read alignment.Genome biology · 2021Review
- Levenshtein Distance, Sequence Comparison and Biological Database Search.IEEE transactions on information theory · 2021Article
- Seq: A High-Performance Language for Bioinformatics.Proceedings of the ACM on programming languages · 2019Article
- A fast adaptive algorithm for computing whole-genome homology maps.Bioinformatics (Oxford, England) · 2018Article
- Statistical Binning for Barcoded Reads Improves Downstream Analyses.Cell systems · 2018Article
- A space and time-efficient index for the compacted colored de Bruijn graph.Bioinformatics (Oxford, England) · 2018Article
- Allelic decomposition and exact genotyping of highly polymorphic and structurally variant genes.Nature communications · 2018Article
- Performance evaluation method for read mapping tool in clinical panel sequencing.Genes & genomics · 2018Article
- False positives in trans-eQTL and co-expression analyses arising from RNA-sequencing alignment errors.F1000Research · 2018Article
- Need for speed in accurate whole-genome data analysis: GENALICE MAP challenges BWA/GATK more than PEMapper/PECaller and Isaac.Proceedings of the National Academy of Sciences of the United States of America · 2017Article
- Fast genotyping of known SNPs through approximate k-mer matching.Bioinformatics (Oxford, England) · 2016Article
Corrections and comments
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Authors and funding
4 authors.
Funding
Abstract
PubMed holds no abstract for this paper.
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Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.