Evidence map›Paper›PMID 27054155›Full record

ArticleData in brief2016

Fluorescence-based thermal shift data on multidrug regulator AcrR from Salmonella enterica subsp. entrica serovar Typhimurium str. LT2.

Babu A Manjasetty, Andrei S Halavaty, Chi-Hao Luan, Jerzy Osipiuk, Rory Mulligan, Keehwan Kwon, Wayne F Anderson, Andrzej Joachimiak

Open access · goldAbstract read
In one paragraph

Article in Data in brief, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 97% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 6 institutions in 2 countries.

Babu A ManjasettyEuropean Molecular Biology Laboratory (EMBL), Grenoble Outstation, 71 Avenue des Martyrs, F-38042 Grenoble, France; Unit of Virus-Host Cell interactions (UVHCI), University of Grenoble Alpes, F-38042 Grenoble, France.
Andrei S HalavatyBiochemistry and Molecular Genetics, Feinberg School of Medicine, Northwestern University, 303 East Chicago Avenue, Chicago, IL 60611, United States; Center for Structural Genomics of Infectious Diseases (CSGID), 303 East Chicago Avenue, Chicago, IL 60626, United States.
Chi-Hao LuanCenter for Structural Genomics of Infectious Diseases (CSGID), 303 East Chicago Avenue, Chicago, IL 60626, United States; High Throughput Analysis Laboratory, Northwestern University, 2205 Tech Drive, Evanston, IL 60208, United States.
Jerzy OsipiukCenter for Structural Genomics of Infectious Diseases (CSGID), 303 East Chicago Avenue, Chicago, IL 60626, United States; Computational Institute, The University of Chicago, 5735 South Ellis Avenue, Chicago, IL 60637, United States; Structural Biology Center, Argonne National Laboratory, 9700 South Cass Avenue, Argonne, IL 60439, United States.
Rory MulliganCenter for Structural Genomics of Infectious Diseases (CSGID), 303 East Chicago Avenue, Chicago, IL 60626, United States; Computational Institute, The University of Chicago, 5735 South Ellis Avenue, Chicago, IL 60637, United States; Structural Biology Center, Argonne National Laboratory, 9700 South Cass Avenue, Argonne, IL 60439, United States.
Keehwan KwonCenter for Structural Genomics of Infectious Diseases (CSGID), 303 East Chicago Avenue, Chicago, IL 60626, United States; Infectious Diseases, J. Craig Venter Institute, Rockville, MD, United States.
Wayne F AndersonBiochemistry and Molecular Genetics, Feinberg School of Medicine, Northwestern University, 303 East Chicago Avenue, Chicago, IL 60611, United States; Center for Structural Genomics of Infectious Diseases (CSGID), 303 East Chicago Avenue, Chicago, IL 60626, United States.
Andrzej JoachimiakCenter for Structural Genomics of Infectious Diseases (CSGID), 303 East Chicago Avenue, Chicago, IL 60626, United States; Computational Institute, The University of Chicago, 5735 South Ellis Avenue, Chicago, IL 60637, United States; Structural Biology Center, Argonne National Laboratory, 9700 South Cass Avenue, Argonne, IL 60439, United States.
Northwestern University · USArgonne National Laboratory · USEuropean Molecular Biology Laboratory · FRJ. Craig Venter Institute · USJoint Center for Structural Genomics · USUniversity of Chicago · US

Funding

NIAID NIH HHS HHSN272200700058CNIAID NIH HHS HHSN272201200026C
6 · The paper itself

Abstract

The fluorescence-based thermal shift (FTS) data presented here include Table S1 and Fig. S1, and are supplemental to our original research article describing detailed structural, FTS, and fluorescence polarization analyses of the Salmonella enterica subsp. entrica serovar Typhimurium str. LT2 multidrug transcriptional regulator AcrR (StAcrR) (doi:10.1016/j.jsb.2016.01.008) (Manjasetty et al., 2015 [1]). Table S1 contains chemical formulas, a Chemical Abstracts Service (CAS) Registry Number (CAS no.), FTS rank (a ligand with the highest rank) has the largest difference in the melting temperature (ΔT m), and uses as drug molecules against various pathological conditions of sixteen small-molecule ligands that increase thermal stability of StAcrR. Thermal stability of human enolase 1, a negative control protein, was not affected in the presence of various concentrations of the top six StAcrR binders (Fig. S1).

Indexed as

AcrRFluorescence-based thermal shift analysisHigh-throughout screeningInfectious diseasesSalmonella entericaTetRTranscriptional regulator

Identifiers

PMID27054155
PMCPMC4796704
OpenAlexW2307748217

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.