Evidence map›Paper›PMID 27052372›Full record

ArticleScientific reports2016

A Novel SRP Recognition Sequence in the Homeostatic Control Region of Heat Shock Transcription Factor σ32.

Ryoji Miyazaki, Takashi Yura, Takehiro Suzuki, Naoshi Dohmae, Hiroyuki Mori, Yoshinori Akiyama

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Article
  3. Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  4. Article
  5. The Dynamic SecYEG Translocon.Frontiers in molecular biosciences · 2021
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Regulation of bacterial heat shock stimulons.Cell stress & chaperones · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Ryoji MiyazakiInstitute for Virus Research, Kyoto University, Kyoto 606-8507, Japan.
Takashi YuraFaculty of Life Sciences, Kyoto Sangyo University, Kyoto 603-8555, Japan.
Takehiro SuzukiCenter for Sustainable Resource Science, RIKEN, Saitama 351-0198, Japan.
Naoshi DohmaeCenter for Sustainable Resource Science, RIKEN, Saitama 351-0198, Japan.
Hiroyuki MoriInstitute for Virus Research, Kyoto University, Kyoto 606-8507, Japan.
Yoshinori AkiyamaInstitute for Virus Research, Kyoto University, Kyoto 606-8507, Japan.
Kyoto University · JPRIKEN Center for Sustainable Resource Science · JPKyoto Sangyo University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Heat shock response (HSR) generally plays a major role in sustaining protein homeostasis. In Escherichia coli, the activity and amount of the dedicated transcription factor σ(32) transiently increase upon heat shock. The initial induction is followed by chaperone-mediated negative feedback to inactivate and degrade σ(32). Previous work reported that signal recognition particle (SRP)-dependent targeting of σ(32) to the membrane is essential for feedback control, though how SRP recognizes σ(32) remained unknown. Extensive photo- and disulfide cross-linking studies in vivo now reveal that the highly conserved regulatory region of σ(32) that lacks a consecutive hydrophobic stretch interacts with the signal peptide-binding site of Ffh (the protein subunit of SRP). Importantly, the σ(32)-Ffh interaction observed was significantly affected by mutations in this region that compromise the feedback regulation, but not by deleting the DnaK/DnaJ chaperones. Homeostatic regulation of HSR thus requires a novel type of SRP recognition mechanism.

Indexed as

Regulatory Sequences, Nucleic AcidAmino Acid SequenceBinding SitesDisulfidesEscherichia coli ProteinsFeedback, PhysiologicalHeat-Shock ProteinsHomeostasisHSP40 Heat-Shock ProteinsHSP70 Heat-Shock ProteinsHSP90 Heat-Shock ProteinsImmunoblottingModels, MolecularMutationProtein BindingProtein DomainsDisulfidesDnaJ protein, E colidnaK protein, E coliEscherichia coli ProteinsHeat-Shock Proteinsheat-shock sigma factor 32HSP40 Heat-Shock ProteinsHSP70 Heat-Shock ProteinsHSP90 Heat-Shock ProteinsHtpG protein, E coliSigma FactorSignal Recognition Particle

Identifiers

PMID27052372
PMCPMC4823717
OpenAlexW2317003847

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.