ArticleJournal of plant research2016
Genome sequencing of Metrosideros polymorpha (Myrtaceae), a dominant species in various habitats in the Hawaiian Islands with remarkable phenotypic variations.
Article in Journal of plant research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
9 citing papers in PubMed, 22 citations in OpenAlex.
- High species richness in the lichen genusPersoonia · 2023Article
- The clove (Syzygium aromaticum) genome provides insights into the eugenol biosynthesis pathway.Communications biology · 2022Article
- Demography and selection analysis of the incipient adaptive radiation of a Hawaiian woody species.PLoS genetics · 2022Article
- Ancestral polymorphisms shape the adaptive radiation ofProceedings of the National Academy of Sciences of the United States of America · 2021Article
- Leaf trichomes in Metrosideros polymorpha can contribute to avoiding extra water stress by impeding gall formation.Annals of botany · 2020Article
- Divergent Selection and Primary Gene Flow Shape Incipient Speciation of a Riparian Tree on Hawaii Island.Molecular biology and evolution · 2020Article
- Updated Genome Assembly and Annotation forG3 (Bethesda, Md.) · 2019Article
- High-throughput sequencing analysis of3 Biotech · 2019Article
- The Roles of Mitochondrion in Intergenomic Gene Transfer in Plants: A Source and a Pool.International journal of molecular sciences · 2018Article
Corrections and comments
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Authors and funding
8 authors at 4 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Whole genome sequences, which can be provided even for non-model organisms owing to high-throughput sequencers, are valuable in enhancing the understanding of adaptive evolution. Metrosideros polymorpha, a tree species endemic to the Hawaiian Islands, occupies a wide range of ecological habitats and shows remarkable polymorphism in phenotypes among/within populations. The biological functions of genetic variations observed within this species could provide significant insights into the adaptive radiation found in a single species. Here de novo assembled genome sequences of M. polymorpha are presented to reveal basic genomic parameters about this species and to develop our knowledge of ecological divergences. The assembly yielded 304-Mbp genome sequences, half of which were covered by 19 scaffolds with >5 Mbp, and contained 30 K protein-coding genes. Demographic history inferred from the genome-wide heterozygosity indicated that this species experienced a dramatic rise and fall in the effective population size, possibly owing to past geographic or climatic changes in the Hawaiian Islands. This M. polymorpha genome assembly represents a high-quality genome resource useful for future functional analyses of both intra- and interspecies genetic variations or comparative genomics.
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