Evidence map›Paper›PMID 27052100›Full record

ArticleScientific reports2016

Characterization of Discrete Phosphopantetheinyl Transferases in Streptomyces tsukubaensis L19 Unveils a Complicate Phosphopantetheinylation Network.

Yue-Yue Wang, Xiao-Sheng Zhang, Hong-Dou Luo, Ni-Ni Ren, Xin-Hang Jiang, Hui Jiang, Yong-Quan Li

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.8field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 26 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Yue-Yue WangCollege of Life Sciences, Zhejiang University, Hangzhou, 310058, China.
Xiao-Sheng ZhangCollege of Life Sciences, Zhejiang University, Hangzhou, 310058, China.
Hong-Dou LuoCollege of Life Sciences, Zhejiang University, Hangzhou, 310058, China.
Ni-Ni RenCollege of Life Sciences, Zhejiang University, Hangzhou, 310058, China.
Xin-Hang JiangCollege of Life Sciences, Zhejiang University, Hangzhou, 310058, China.
Hui JiangCollege of Life Sciences, Zhejiang University, Hangzhou, 310058, China.
Yong-Quan LiCollege of Pharmaceutical Sciences, Zhejiang University, Hangzhou, 310058, China.
Zhejiang University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phosphopantetheinyl transferases (PPTases) play essential roles in both primary metabolisms and secondary metabolisms via post-translational modification of acyl carrier proteins (ACPs) and peptidyl carrier proteins (PCPs). In this study, an industrial FK506 producing strain Streptomyces tsukubaensis L19, together with Streptomyces avermitilis, was identified to contain the highest number (five) of discrete PPTases known among any species thus far examined. Characterization of the five PPTases in S. tsukubaensis L19 unveiled that stw ACP, an ACP in a type II PKS, was phosphopantetheinylated by three PPTases FKPPT1, FKPPT3, and FKACPS; sts FAS ACP, the ACP in fatty acid synthase (FAS), was phosphopantetheinylated by three PPTases FKPPT2, FKPPT3, and FKACPS; TcsA-ACP, an ACP involved in FK506 biosynthesis, was phosphopantetheinylated by two PPTases FKPPT3 and FKACPS; FkbP-PCP, an PCP involved in FK506 biosynthesis, was phosphopantetheinylated by all of these five PPTases FKPPT1-4 and FKACPS. Our results here indicate that the functions of these PPTases complement each other for ACPs/PCPs substrates, suggesting a complicate phosphopantetheinylation network in S. tsukubaensis L19. Engineering of these PPTases in S. tsukubaensis L19 resulted in a mutant strain that can improve FK506 production.

Indexed as

Metabolic Networks and PathwaysAcyl Carrier ProteinAmino Acid SequenceBacterial ProteinsCarrier ProteinsChromatography, High Pressure LiquidFermentationGenome, BacterialMass SpectrometryMultigene FamilyMutationSequence Homology, Amino AcidStreptomycesTacrolimusTransferases (Other Substituted Phosphate Groups)Acyl Carrier ProteinBacterial ProteinsCarrier Proteinsphosphopantetheinyl transferaseTacrolimusTransferases (Other Substituted Phosphate Groups)

Identifiers

PMID27052100
PMCPMC4823652
OpenAlexW2320487061

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.