Evidence map›Paper›PMID 27051194›Full record

ArticleVeterinary world2016

Effect of heat shock protein 70 polymorphism on thermotolerance in Tharparkar cattle.

Sandip Bhat, Pushpendra Kumar, Neeraj Kashyap, Bharti Deshmukh, Mahesh Shivanand Dige, Bharat Bhushan, Anuj Chauhan, Amit Kumar, Gyanendra Singh

Open access · goldAbstract read
In one paragraph

Article in Veterinary world, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 80 citations in OpenAlex.

  1. Review
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  11. Genetic profiling ofBrazilian journal of veterinary medicine · 2022
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  15. Article
  16. Association Analysis of Polymorphisms in the 5' Flanking Region of theAnimals : an open access journal from MDPI · 2020
    Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Sandip BhatDivision of Animal Genetics, Indian Veterinary Research Institute, Izatnagar, Uttar Pradesh, India.
Pushpendra KumarDivision of Animal Genetics, Indian Veterinary Research Institute, Izatnagar, Uttar Pradesh, India.
Neeraj KashyapDivision of Animal Genetics, Indian Veterinary Research Institute, Izatnagar, Uttar Pradesh, India.
Bharti DeshmukhDepartment of Animal Genetics and Breeding, Govind Ballabh Pant University of Agriculture and Technology, Pantnagar, Uttarakhand, India.
Mahesh Shivanand DigeDivision of Animal Genetics, Indian Veterinary Research Institute, Izatnagar, Uttar Pradesh, India.
Bharat BhushanDivision of Animal Genetics, Indian Veterinary Research Institute, Izatnagar, Uttar Pradesh, India.
Anuj ChauhanDivision of Animal Genetics, Indian Veterinary Research Institute, Izatnagar, Uttar Pradesh, India.
Amit KumarDivision of Animal Genetics, Indian Veterinary Research Institute, Izatnagar, Uttar Pradesh, India.
Gyanendra SinghDivision of Physiology and Climatology, Indian Veterinary Research Institute, Izatnagar, Uttar Pradesh, India.
Indian Veterinary Research Institute · INGovind Ballabh Pant University of Agriculture and Technology · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimOut of various members of heat shock protein (HSP) superfamily which act a molecular chaperon by binding to the denaturing protein thus stabilizing them and preserving their activity, HSP70 are of major importance in thermotolerance development. Thus, present investigation aimed at a screening of HSP70 gene for polymorphisms and possible differences in thermotolerance in Tharparkar breed of cattle. MATERIALS AND

methodsA 295 bp fragment of HSP70 gene was subjected to polymerase chain reaction-single-strand conformation polymorphism (SSCP) followed by sequencing of different SSCP patterns in 64 Tharparkar cattle. A comparative thermotolerance of identified genotypes was analyzed using heat tolerance coefficients (HTCs) of animals for different seasons.

resultsThree SSCP patterns and consequently two alleles namely A and B were documented in one fragment of HSP70 gene. On sequencing, one single-nucleotide polymorphism with G > T substitution was found at a position that led to a change of amino acid aspartate to tyrosine in allele A. It was found that in maintaining near normal average rectal temperature, genotype AA was superior (p≤0.01). Genotype AA, thus, was found to be most thermotolerant genotype with the highest HTC (p≤0.01).

conclusionThe polymorphism at HSP70 is expected to be a potent determinant for heat tolerance in cattle, which may aid in selection for thermotolerance in cattle.

Indexed as

cattleheat shock protein 70heat tolerancepolymorphism, Tharparkar

Identifiers

PMID27051194
PMCPMC4819358
OpenAlexW2347070717

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.