Evidence map›Paper›PMID 27050815›Full record

ArticlePloS one2016

Paucity of HPV-Related Head and Neck Cancers (HNC) in Nigeria.

Emmanuel A Oga, Lisa M Schumaker, Biodun Sulyman Alabi, Darlington Obaseki, Aniefon Umana, Ima-Abasi Bassey, Godwin Ebughe, Olabode Oluwole, Teniola Akeredolu, Sally N Adebamowo and 3 more

Abstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Review
  4. Review
  5. Article
  6. Review
  7. Article
  8. Epidemiology of HPV Related Malignancies.Seminars in radiation oncology · 2021
    Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Emmanuel A OgaDepartment of Epidemiology and Public Health, University of Maryland School of Medicine, Baltimore, Maryland, United States of America.
Lisa M SchumakerMarlene and Stewart Greenebaum Cancer Centre, University of Maryland School of Medicine, Baltimore, Maryland, United States of America.
Biodun Sulyman AlabiDepartment of Ear Nose and Throat, Head & Neck Surgery, University of Ilorin Teaching Hospital, Ilorin, Kwara State, Nigeria.
Darlington ObasekiUniversity of Benin Teaching Hospital, Benin, Edo State, Nigeria.
Aniefon UmanaUniversity of Calabar Teaching Hospital, Calabar, Cross River State, Nigeria.
Ima-Abasi BasseyUniversity of Calabar Teaching Hospital, Calabar, Cross River State, Nigeria.
Godwin EbugheUniversity of Calabar Teaching Hospital, Calabar, Cross River State, Nigeria.
Olabode OluwoleUniversity of Abuja Teaching Hospital, Abuja, FCT, Nigeria.
Teniola AkeredoluOffice of Research, Training and Strategic Information, Institute of Human Virology Nigeria, Abuja, FCT, Nigeria.
Sally N AdebamowoOffice of Research, Training and Strategic Information, Institute of Human Virology Nigeria, Abuja, FCT, Nigeria.
Patrick DakumOffice of Research, Training and Strategic Information, Institute of Human Virology Nigeria, Abuja, FCT, Nigeria.
Kevin CullenMarlene and Stewart Greenebaum Cancer Centre, University of Maryland School of Medicine, Baltimore, Maryland, United States of America.
Clement A AdebamowoDepartment of Epidemiology and Public Health, University of Maryland School of Medicine, Baltimore, Maryland, United States of America.

Funding

African Collaborative Center for Microbiome and Genomics Research (ACCME)U54HG006947 · NHGRI · INSTITUTE OF HUMAN VIROLOGY · PI ADEBAMOWO, CLEMENT ADEBAYO · 2013 to 2018
$5.7M
Capacity Development for Research into AIDS Associated malignancies (CADRE)D43CA153792 · NCI · UNIVERSITY OF MARYLAND BALTIMORE · PI ADEBAMOWO, CLEMENT ADEBAYO · 2010 to 2013
$1.8M
NCI NIH HHS D43 CA153792NCI NIH HHS D43CA153792-01NHGRI NIH HHS U54 HG006947
6 · The paper itself

Abstract

introductionThe burden of HPV-related Head and Neck Cancers (HNC) has been rising in the U.S. and other developed countries but this trend has not been reported in Africa. Objective of study was to evaluate the prevalence of HPV infection in HNC cancer cases seen between 1990 and 2011 at the tertiary health care institutions in Nigeria.

methodsWe retrieved 149 head and neck cancer formalin fixed, paraffin embedded tumor specimens diagnosed between 1990 and 2011 from four teaching hospitals in Nigeria. One hundred and twenty-three blocks (83%) contained appropriate HNC for analysis while DNA extraction was successful in 60% (90/149). PCR amplification was successful in 33% (49/149) and Linear Array genotyping for HPV was successful in 11% (17/149) of these cases. These were in tumors from the larynx (6), cervical lymph nodes (3), nasal cavity (2), parotid (1), palate (1), maxillary sinus (1) and mandible (1). Two cases were non-specific and none were from the oropharynx. Histologically, 41% (7/17) of the successfully genotyped blocks were squamous cell carcinomas (larynx 6, maxillary sinus 1). RESULTS AND

conclusionWe were unable to detect HPV in any of the HNC samples in our study. Our result may suggest that there is a low prevalence of HPV-related HNC among the adult population in Nigeria. Our results provide a benchmark to compare future incidence of HPV -related HNC in this community in future. We had significant analytical challenges from possible poor tissue processing and urge that future studies should prospectively collect samples and ensure high quality sample processing.

Indexed as

AdultAlphapapillomavirusFemaleHead and Neck NeoplasmsHumansMaleNigeriaTumor Virus InfectionsYoung Adult

Identifiers

PMID27050815
PMCPMC4822856

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.