ArticleScientific reports2016
Identification and characterization of histone lysine methylation modifiers in Fragaria vesca.
Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.
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Who cites it
17 citing papers in PubMed.
- Dynamic regulatory mechanisms of histone methylation in plant development and environmental adaptation.Horticulture research · 2026Article
- Identification of watermelon H3K4 and H3K27 genes and their expression profiles during watermelon fruit development.Molecular biology reports · 2023Article
- Functional Characterization of the Lysine-Specific Histone Demethylases Family in Soybean.Plants (Basel, Switzerland) · 2022Article
- Duplication and Specialization of NUDX1 in Rosaceae Led to Geraniol Production in Rose Petals.Molecular biology and evolution · 2022Article
- 2b-RAD Genotyping of the SeagrassFrontiers in genetics · 2022Article
- Histone variants and modifications during abiotic stress response.Frontiers in plant science · 2022Review
- Characterization and Stress Response of the JmjC Domain-Containing Histone Demethylase Gene Family in the Allotetraploid Cotton SpeciesPlants (Basel, Switzerland) · 2020Article
- Bioinformatics and expression analysis of histone modification genes in grapevine predict their involvement in seed development, powdery mildew resistance, and hormonal signaling.BMC plant biology · 2020Article
- A roadmap for research in octoploid strawberry.Horticulture research · 2020Review
- Identification of histone methylation modifiers and their expression patterns during somatic embryogenesis in Hevea brasiliensis.Genetics and molecular biology · 2020Article
- A native chromatin immunoprecipitation (ChIP) protocol for studying histone modifications in strawberry fruits.Plant methods · 2020Article
- Identification, Evolution, and Expression Profiling of Histone Lysine Methylation Moderators inPlants (Basel, Switzerland) · 2019Article
- Identification and expression analysis of strigolactone biosynthetic and signaling genes reveal strigolactones are involved in fruit development of the woodland strawberry (Fragaria vesca).BMC plant biology · 2019Article
- The Four FAD-Dependent Histone Demethylases of Arabidopsis Are Differently Involved in the Control of Flowering Time.Frontiers in plant science · 2019Article
- Genome-Wide Identification ofInternational journal of genomics · 2017Article
- Genome-Wide Identification of Histone Modifiers and Their Expression Patterns during Fruit Abscission in Litchi.Frontiers in plant science · 2017Article
- Genome-Wide Analysis of Soybean JmjC Domain-Containing Proteins Suggests Evolutionary Conservation Following Whole-Genome Duplication.Frontiers in plant science · 2016Article
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Authors and funding
5 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The diploid woodland strawberry (Fragaria vesca) is an important model for fruit crops because of several unique characteristics including the small genome size, an ethylene-independent fruit ripening process, and fruit flesh derived from receptacle tissues rather than the ovary wall which is more typical of fruiting plants. Histone methylation is an important factor in gene regulation in higher plants but little is known about its roles in fruit development. We have identified 45 SET methyltransferase, 22 JmjC demethylase and 4 LSD demethylase genes in F. vesca. The analysis of these histone modifiers in eight plant species supports the clustering of those genes into major classes consistent with their functions. We also provide evidence that whole genome duplication and dispersed duplications via retrotransposons may have played pivotal roles in the expansion of histone modifier genes in F. vesca. Furthermore, transcriptome data demonstrated that expression of some SET genes increase as the fruit develops and peaks at the turning stage. Meanwhile, we have observed that expression of those SET genes responds to cold and heat stresses. Our results indicate that regulation of histone methylation may play a critical role in fruit development as well as responses to abiotic stresses in strawberry.
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