Evidence map›Paper›PMID 27048994›Full record

ArticleNature communications2016

Cryo-EM structure of lysenin pore elucidates membrane insertion by an aerolysin family protein.

Monika Bokori-Brown, Thomas G Martin, Claire E Naylor, Ajit K Basak, Richard W Titball, Christos G Savva

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 89 papers.

0numbers the graph read from it
0cells of the map it votes in
89citing papers in PubMed
31.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

89 citing papers in PubMed, 163 citations in OpenAlex.

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  17. Blobs form during the single-file transport of proteins across nanopores.Proceedings of the National Academy of Sciences of the United States of America · 2024
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29 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Monika Bokori-BrownBiosciences, College of Life and Environmental Sciences, University of Exeter, Stocker Road, Exeter EX4 4QD, UK.
Thomas G MartinMRC Laboratory of Molecular Biology, Francis Crick Avenue, Cambridge Biomedical Campus, Cambridge CB2 0QH, UK.
Claire E NaylorDepartment of Biological Sciences, Birkbeck College, Malet Street, London WC1E 7HX, UK.
Ajit K BasakDepartment of Biological Sciences, Birkbeck College, Malet Street, London WC1E 7HX, UK.
Richard W TitballBiosciences, College of Life and Environmental Sciences, University of Exeter, Stocker Road, Exeter EX4 4QD, UK.
Christos G SavvaMRC Laboratory of Molecular Biology, Francis Crick Avenue, Cambridge Biomedical Campus, Cambridge CB2 0QH, UK.
Birkbeck, University of London · GBMRC Laboratory of Molecular Biology · GBUniversity of Exeter · GB

Funding

Medical Research Council MC-A021-53019Medical Research Council MC_U105184322Wellcome TrustWellcome Trust WT089618MA
6 · The paper itself

Abstract

Lysenin from the coelomic fluid of the earthworm Eisenia fetida belongs to the aerolysin family of small β-pore-forming toxins (β-PFTs), some members of which are pathogenic to humans and animals. Despite efforts, a high-resolution structure of a channel for this family of proteins has been elusive and therefore the mechanism of activation and membrane insertion remains unclear. Here we determine the pore structure of lysenin by single particle cryo-EM, to 3.1 Å resolution. The nonameric assembly reveals a long β-barrel channel spanning the length of the complex that, unexpectedly, includes the two pre-insertion strands flanking the hypothetical membrane-insertion loop. Examination of other members of the aerolysin family reveals high structural preservation in this region, indicating that the membrane-insertion pathway in this family is conserved. For some toxins, proteolytic activation and pro-peptide removal will facilitate unfolding of the pre-insertion strands, allowing them to form the β-barrel of the channel.

Indexed as

Cryoelectron MicroscopyBacterial ToxinsCell MembraneHumansLipidsModels, MolecularPore Forming Cytotoxic ProteinsProtein Structure, SecondarySolubilityToxins, BiologicalWateraerolysinBacterial ToxinsLipidslyseninPore Forming Cytotoxic ProteinsToxins, BiologicalWater

Identifiers

PMID27048994
PMCPMC4823867
OpenAlexW2316123699

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.