Evidence map›Paper›PMID 27048512›Full record

ReviewTheory in biosciences = Theorie in den Biowissenschaften2016

Neural model of gene regulatory network: a survey on supportive meta-heuristics.

Surama Biswas, Sriyankar Acharyya

Abstract readReview
PubMed Publisher
In one paragraph

Review in Theory in biosciences = Theorie in den Biowissenschaften, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Surama BiswasDepartment of Computer Science and Engineering, West Bengal University of Technology (WBUT), BF-142, Sector-I, Salt Lake, Kolkata, India. surama.biswas@gmail.com.ORCID http://orcid.org/0000-0001-5979-3605
Sriyankar AcharyyaDepartment of Computer Science and Engineering, West Bengal University of Technology (WBUT), BF-142, Sector-I, Salt Lake, Kolkata, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gene regulatory network (GRN) is produced as a result of regulatory interactions between different genes through their coded proteins in cellular context. Having immense importance in disease detection and drug finding, GRN has been modelled through various mathematical and computational schemes and reported in survey articles. Neural and neuro-fuzzy models have been the focus of attraction in bioinformatics. Predominant use of meta-heuristic algorithms in training neural models has proved its excellence. Considering these facts, this paper is organized to survey neural modelling schemes of GRN and the efficacy of meta-heuristic algorithms towards parameter learning (i.e. weighting connections) within the model. This survey paper renders two different structure-related approaches to infer GRN which are global structure approach and substructure approach. It also describes two neural modelling schemes, such as artificial neural network/recurrent neural network based modelling and neuro-fuzzy modelling. The meta-heuristic algorithms applied so far to learn the structure and parameters of neutrally modelled GRN have been reviewed here.

Indexed as

Gene Regulatory NetworksHeuristicsNeural Networks, ComputerAlgorithmsAnimalsComputational BiologyComputer SimulationHumansModels, GeneticModels, TheoreticalGene regulatory networkMeta-heuristic algorithmMicroarray gene expression dataNeuro-fuzzy modellingOptimizationRecurrent neural network

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.