Evidence map›Paper›PMID 27047129›Full record

ArticleVeterinary world2015

Single nucleotide markers of D-loop for identification of Indian wild pig (Sus scrofa cristatus).

Gaurav Kumar Srivastava, Nidhi Rajput, Kajal Kumar Jadav, Avadh Bihari Shrivastav, Himanshu R Joshi

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Article in Veterinary world, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Mitochondrial DNA Diversity in Large White Pigs in Russia.Animals : an open access journal from MDPI · 2020
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Gaurav Kumar SrivastavaCentre for Wildlife Forensic and Health, Nanaji Deshmukh Veterinary Science University, Jabalpur, Madhya Pradesh, India.
Nidhi RajputCentre for Wildlife Forensic and Health, Nanaji Deshmukh Veterinary Science University, Jabalpur, Madhya Pradesh, India.
Kajal Kumar JadavCentre for Wildlife Forensic and Health, Nanaji Deshmukh Veterinary Science University, Jabalpur, Madhya Pradesh, India.
Avadh Bihari ShrivastavCentre for Wildlife Forensic and Health, Nanaji Deshmukh Veterinary Science University, Jabalpur, Madhya Pradesh, India.
Himanshu R JoshiCentre for Wildlife Forensic and Health, Nanaji Deshmukh Veterinary Science University, Jabalpur, Madhya Pradesh, India.
Nanaji Deshmukh Veterinary Science University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimPartial fragment of D-loop region extending from 35 to 770 were compared with corresponding sequences of 16 wild pigs and 9 domestic pig breeds from different parts of the world for detection of single nucleotide polymorphism (SNP) markers in the region. The paper also reappraises SNP markers from two fragments of cytochrome b gene and a fragment 12S rRNA gene distinguishing the Indian wild pig from other pig species of the world. MATERIALS AND

methodsDeoxyribonucleic acid (DNA) was isolated from 14 and 12 tissue samples of Indian wild and domestic pigs, respectively, collected from Central India for characterization of the D-loop DNA sequences using universal primers. The sequences obtained were aligned along with the retrieved sequences to analyze species-specific SNP marker.

resultsA total of 58 mitochondrial D-loop gene sequences of pig races were aligned to identify 1349 polymorphic sites in the fragment from nucleotide positions 35-770 bp and four SNP markers were identified to differentiate Indian wild pig from all the sequences investigated in this study. With the inclusion of cytochrome b gene and 12S rRNA gene fragments, the present study contributes to the total 15 SNP markers, which have been identified in the mitochondrial fragment of 1936 bp for identification of Indian wild pig.

conclusionSNP markers have advantages over other marker types and do not require subsequent standardization to compare data across studies or laboratories.

Indexed as

D-loopIndian wild pigsingle nucleotide markersspecies identification

Identifiers

PMID27047129
PMCPMC4774806
OpenAlexW2022573116

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.