Evidence map›Paper›PMID 27046938›Full record

ArticleBiometrika2015

Optimal multiple testing under a Gaussian prior on the effect sizes.

Edgar Dobriban, Kristen Fortney, Stuart K Kim, Art B Owen

Abstract read
In one paragraph

Article in Biometrika, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Edgar DobribanDepartment of Statistics, Stanford University, Stanford, California 94305, U.S.A.
Kristen FortneyDepartment of Developmental Biology, Stanford University, Stanford, California 94305, U.S.A. kfortney@stanford.edu stuartkm@stanford.edu.
Stuart K KimDepartment of Developmental Biology, Stanford University, Stanford, California 94305, U.S.A. kfortney@stanford.edu stuartkm@stanford.edu.
Art B OwenDepartment of Statistics, Stanford University, Stanford, California 94305, U.S.A. owen@stanford.edu.

Funding

Mechanisms of Aging in C. elegansR01AG025941 · NIA · STANFORD UNIVERSITY · PI DAVIS, RONALD WAYNE · 2007 to 2017
$3.1M
NIA NIH HHS R01 AG025941
6 · The paper itself

Abstract

We develop a new method for large-scale frequentist multiple testing with Bayesian prior information. We find optimal [Formula: see text]-value weights that maximize the average power of the weighted Bonferroni method. Due to the nonconvexity of the optimization problem, previous methods that account for uncertain prior information are suitable for only a small number of tests. For a Gaussian prior on the effect sizes, we give an efficient algorithm that is guaranteed to find the optimal weights nearly exactly. Our method can discover new loci in genome-wide association studies and compares favourably to competitors. An open-source implementation is available.

Indexed as

Genome-wide association studyMultiple testingNonconvex optimizationp-value weightingWeighted Bonferroni method

Identifiers

PMID27046938
PMCPMC4813057

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.