Evidence map›Paper›PMID 27046645›Full record

ArticleMolecular psychiatry2016

Towards understanding and predicting suicidality in women: biomarkers and clinical risk assessment.

D F Levey, E M Niculescu, H Le-Niculescu, H L Dainton, P L Phalen, T B Ladd, H Weber, E Belanger, D L Graham, F N Khan and 11 more

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular psychiatry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed, 4 pooled it
21.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 4 syntheses or guidelines pooled it, 92 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Artificial Intelligence and Suicide Prevention: A Systematic Review of Machine Learning Investigations.International journal of environmental research and public health · 2020
    Pooled it
  4. Pooled it
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Navigating the Intersection of Technology and Depression Precision Medicine.Advances in experimental medicine and biology · 2024
    Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Rare protein-coding variants implicate genes involved in risk of suicide death.American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics · 2021
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 5 institutions in 1 country.

D F LeveyDepartment of Psychiatry, Indiana University School of Medicine, Indianapolis, IN, USA.
E M NiculescuDepartment of Psychiatry, Indiana University School of Medicine, Indianapolis, IN, USA.
H Le-NiculescuDepartment of Psychiatry, Indiana University School of Medicine, Indianapolis, IN, USA.
H L DaintonDepartment of Psychiatry, Indiana University School of Medicine, Indianapolis, IN, USA.
P L PhalenIndianapolis Veterans' Affairs Medical Center, Indianapolis, IN, USA.
T B LaddDepartment of Psychiatry, Indiana University School of Medicine, Indianapolis, IN, USA.
H WeberIndianapolis Veterans' Affairs Medical Center, Indianapolis, IN, USA.
E BelangerIndianapolis Veterans' Affairs Medical Center, Indianapolis, IN, USA.
D L GrahamIndianapolis Veterans' Affairs Medical Center, Indianapolis, IN, USA.
F N KhanDepartment of Psychiatry, Indiana University School of Medicine, Indianapolis, IN, USA.
N P VanipentaDepartment of Psychiatry, Indiana University School of Medicine, Indianapolis, IN, USA.
E C StageDepartment of Psychiatry, Indiana University School of Medicine, Indianapolis, IN, USA.
A BallewMarion County Coroner's Office, Indianapolis, IN, USA.
M YardIndiana Center for Biomarker Research in Neuropsychiatry, Indiana University School of Medicine, Indianapolis, IN, USA.
T GelbartDepartment of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, CA, USA.
A ShekharDepartment of Psychiatry, Indiana University School of Medicine, Indianapolis, IN, USA.
N J SchorkJ. Craig Venter Institute, La Jolla, CA, USA.
S M KurianDepartment of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, CA, USA.
G E SanduskyIndiana Center for Biomarker Research in Neuropsychiatry, Indiana University School of Medicine, Indianapolis, IN, USA.
D R SalomonDepartment of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, CA, USA.
A B NiculescuDepartment of Psychiatry, Indiana University School of Medicine, Indianapolis, IN, USA.
Indiana University – Purdue University Indianapolis · USIndiana University School of MedicineScripps Research Institute · USHamilton County Coroner · USJ. Craig Venter Institute · US

Funding

Developing Blood Tests for Mood DisordersDP2OD007363 · OD · INDIANA UNIVERSITY INDIANAPOLIS · PI NICULESCU, ALEXANDER B · 2010 to 2010
$2.3M
Mood State Blood Biomarkers: A Discovery-Based ApproachI01CX000139 · VA · RLR VA MEDICAL CENTER · PI NICULESCU, ALEXANDER B · 2009 to 2017
–
CSRD VA I01 CX000139NIH HHS DP2 OD007363
6 · The paper itself

Abstract

Women are under-represented in research on suicidality to date. Although women have a lower rate of suicide completion than men, due in part to the less-violent methods used, they have a higher rate of suicide attempts. Our group has previously identified genomic (blood gene expression biomarkers) and clinical information (apps) predictors for suicidality in men. We now describe pilot studies in women. We used a powerful within-participant discovery approach to identify genes that change in expression between no suicidal ideation (no SI) and high suicidal ideation (high SI) states (n=12 participants out of a cohort of 51 women psychiatric participants followed longitudinally, with diagnoses of bipolar disorder, depression, schizoaffective disorder and schizophrenia). We then used a Convergent Functional Genomics (CFG) approach to prioritize the candidate biomarkers identified in the discovery step by using all the prior evidence in the field. Next, we validated for suicidal behavior the top-ranked biomarkers for SI, in a demographically matched cohort of women suicide completers from the coroner's office (n=6), by assessing which markers were stepwise changed from no SI to high SI to suicide completers. We then tested the 50 biomarkers that survived Bonferroni correction in the validation step, as well as top increased and decreased biomarkers from the discovery and prioritization steps, in a completely independent test cohort of women psychiatric disorder participants for prediction of SI (n=33) and in a future follow-up cohort of psychiatric disorder participants for prediction of psychiatric hospitalizations due to suicidality (n=24). Additionally, we examined how two clinical instruments in the form of apps, Convergent Functional Information for Suicidality (CFI-S) and Simplified Affective State Scale (SASS), previously tested in men, perform in women. The top CFI-S item distinguishing high SI from no SI states was the chronic stress of social isolation. We then showed how the clinical information apps combined with the 50 validated biomarkers into a broad predictor (UP-Suicide), our apriori primary end point, predicts suicidality in women. UP-Suicide had a receiver-operating characteristic (ROC) area under the curve (AUC) of 82% for predicting SI and an AUC of 78% for predicting future hospitalizations for suicidality. Some of the individual components of the UP-Suicide showed even better results. SASS had an AUC of 81% for predicting SI, CFI-S had an AUC of 84% and the combination of the two apps had an AUC of 87%. The top biomarker from our sequential discovery, prioritization and validation steps, BCL2, predicted future hospitalizations due to suicidality with an AUC of 89%, and the panel of 50 validated biomarkers (BioM-50) predicted future hospitalizations due to suicidality with an AUC of 94%. The best overall single blood biomarker for predictions was PIK3C3 with an AUC of 65% for SI and an AUC of 90% for future hospitalizations. Finally, we sought to understand the biology of the biomarkers. BCL2 and GSK3B, the top CFG scoring validated biomarkers, as well as PIK3C3, have anti-apoptotic and neurotrophic effects, are decreased in expression in suicidality and are known targets of the anti-suicidal mood stabilizer drug lithium, which increases their expression and/or activity. Circadian clock genes were overrepresented among the top markers. Notably, PER1, increased in expression in suicidality, had an AUC of 84% for predicting future hospitalizations, and CSNK1A1, decreased in expression, had an AUC of 96% for predicting future hospitalizations. Circadian clock abnormalities are related to mood disorder, and sleep abnormalities have been implicated in suicide. Docosahexaenoic acid signaling was one of the top biological pathways overrepresented in validated biomarkers, which is of interest given the potential therapeutic and prophylactic benefits of omega-3 fatty acids. Some of the top biomarkers from the current work in women showed co-directionality of change in expression with our previous work in men, whereas others had changes in opposite directions, underlying the issue of biological context and differences in suicidality between the two genders. With this study, we begin to shed much needed light in the area of female suicidality, identify useful objective predictors and help understand gender commonalities and differences. During the conduct of the study, one participant committed suicide. In retrospect, when the analyses were completed, her UP-Suicide risk prediction score was at the 100 percentile of all participants tested.

Indexed as

AdultArea Under CurveBiomarkersBipolar DisorderDepressionFemaleForecastingGene ExpressionGenomicsHumansPilot ProjectsPsychotic DisordersRisk AssessmentRisk FactorsROC CurveSchizophreniaBiomarkers

Identifiers

PMID27046645
OpenAlexW2331178818

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.