Evidence map›Paper›PMID 27045806›Full record

ArticlePloS one2016

Discovery of piRNAs Pathway Associated with Early-Stage Spermatogenesis in Chicken.

Lu Xu, Lingling Qiu, Guobin Chang, Qixin Guo, Xiangping Liu, Yulin Bi, Yu Zhang, Hongzhi Wang, Zhiteng Li, Xiaoming Guo and 4 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.8field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Lu XuCollege of Animal Science & Technology, Yangzhou University, Yangzhou, Jiangsu, 225009, China.
Lingling QiuCollege of Animal Science & Technology, Yangzhou University, Yangzhou, Jiangsu, 225009, China.
Guobin ChangCollege of Animal Science & Technology, Yangzhou University, Yangzhou, Jiangsu, 225009, China.
Qixin GuoCollege of Animal Science & Technology, Yangzhou University, Yangzhou, Jiangsu, 225009, China.
Xiangping LiuPoultry Institute, Chinese Academy of Agricultural Sciences, Yangzhou, Jiangsu, 225003, China.
Yulin BiCollege of Animal Science & Technology, Yangzhou University, Yangzhou, Jiangsu, 225009, China.
Yu ZhangCollege of Animal Science & Technology, Yangzhou University, Yangzhou, Jiangsu, 225009, China.
Hongzhi WangPoultry Institute, Chinese Academy of Agricultural Sciences, Yangzhou, Jiangsu, 225003, China.
Zhiteng LiCollege of Animal Science & Technology, Yangzhou University, Yangzhou, Jiangsu, 225009, China.
Xiaoming GuoCollege of Animal Science & Technology, Yangzhou University, Yangzhou, Jiangsu, 225009, China.
Fang WanCollege of Animal Science & Technology, Yangzhou University, Yangzhou, Jiangsu, 225009, China.
Yang ZhangCollege of Animal Science & Technology, Yangzhou University, Yangzhou, Jiangsu, 225009, China.
Qi XuCollege of Animal Science & Technology, Yangzhou University, Yangzhou, Jiangsu, 225009, China.
Guohong ChenCollege of Animal Science & Technology, Yangzhou University, Yangzhou, Jiangsu, 225009, China.
Yangzhou University · CNChinese Academy of Agricultural Sciences · CNPoultry Research Institute · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Piwi-interacting RNAs (piRNAs) play a key role in spermatogenesis. Here, we describe the piRNAs profiling of primordial germ cells (PGCs), spermatogonial stem cells (SSCs), and the spermatogonium (Sp) during early-stage spermatogenesis in chicken. We obtained 31,361,989 reads from PGCs, 31,757,666 reads from SSCs, and 46,448,327 reads from Sp cells. The length distribution of piRNAs in the three samples showed peaks at 33 nt. The resulting genes were subsequently annotated against the Gene Ontology (GO) database. Five genes (RPL7A, HSPA8, Pum1, CPXM2, and PRKCA) were found to be involved in cellular processes. Interactive pathway analysis (IPA) further revealed three important pathways in early-stage spermatogenesis including the FGF, Wnt, and EGF receptor signaling pathways. The gene Pum1 was found to promote germline stem cell proliferation, but it also plays a role in spermatogenesis. In conclusion, we revealed characteristics of piRNAs during early spermatogonial development in chicken and provided the basis for future research.

Indexed as

Adult Stem CellsAnimalsAvian ProteinsCell ProliferationChickensGene Expression RegulationMaleRNA, Small InterferingSpermatogenesisAvian ProteinsRNA, Small Interfering

Identifiers

PMID27045806
PMCPMC4821617
OpenAlexW2312822031

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.