Evidence map›Paper›PMID 27045687›Full record

ArticleScientific reports2016

Identification of four new gene members of the KAP6 gene family in sheep.

Huitong Zhou, Hua Gong, Jiqing Wang, Jolon M Dyer, Yuzhu Luo, Jon G H Hickford

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
  2. Article
  3. Characterisation of Four New Genes in the Ovine KAP19 Family.International journal of molecular sciences · 2025
    Article
  4. Article
  5. Review
  6. Article
  7. Exploring Variation in OvineAnimals : an open access journal from MDPI · 2024
    Article
  8. Sequence Variation in CaprineAnimals : an open access journal from MDPI · 2022
    Article
  9. The Complexity of the Ovine and Caprine Keratin-Associated Protein Genes.International journal of molecular sciences · 2021
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Variation in the Caprine KAP24-1 Gene Affects Cashmere Fibre Diameter.Animals : an open access journal from MDPI · 2019
    Article
  19. Variation inArchives animal breeding · 2019
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Huitong ZhouGansu Key Laboratory of Herbivorous Animal Biotechnology, Faculty of Animal Science and Technology, Gansu Agricultural University, Lanzhou 730070, China.
Hua GongDepartment of Agricultural Science, Faculty of Agriculture and Life Sciences, Lincoln University, Lincoln 7647, New Zealand.
Jiqing WangGansu Key Laboratory of Herbivorous Animal Biotechnology, Faculty of Animal Science and Technology, Gansu Agricultural University, Lanzhou 730070, China.
Jolon M DyerLincoln Research Centre, AgResearch Limited, PO Box 8742, Lincoln 8140, New Zealand.
Yuzhu LuoGansu Key Laboratory of Herbivorous Animal Biotechnology, Faculty of Animal Science and Technology, Gansu Agricultural University, Lanzhou 730070, China.
Jon G H HickfordDepartment of Agricultural Science, Faculty of Agriculture and Life Sciences, Lincoln University, Lincoln 7647, New Zealand.
Lincoln University · NZGansu Agricultural University · CNAgResearch · NZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

KAP6 is a high glycine-tyrosine keratin-associated protein (HGT-KAP) family. This family is thought to contain multiple genes. In this study, we used a KRTAP6 coding sequence to search the Ovine Genome (v3.1) and identified five homologous regions (R1-R5). All these regions contained an open reading frame, and they were either identical to, or highly similar to, sheep skin Expressed Sequence Tags (ESTs). Phylogenetic analysis revealed that R1-R5 were clustered with KAP6 sequences from different species and formed a group distinct to other HGT-KAPs. R1 was very similar to the characterised KRTAP6-1 sequence, but the remaining genes appeared to be new. PCR primers were designed to amplify and confirm the presence of these new genes. Amplicons were obtained for all of the 96 sheep investigated. Six, five, three and six PCR-SSCP patterns representing six, five, three and six DNA sequences were observed for KRTAP6-2 to KRTAP6-5 respectively. KRTAP6-2 and KRTAP6-4 had five and three SNPs respectively. Three SNPs and a 45-bp insertion/deletion were detected for KRTAP6-3, and five SNPs and an 18-bp insertion/deletion were identified for KRTAP6-5. Allele frequencies for these KAP6 genes differed between Merino and Romney sheep.

Indexed as

Gene Expression RegulationMultigene FamilyAllelesAnimalsChromosomesDatabases, ProteinDNA PrimersExpressed Sequence TagsGene DeletionGene FrequencyGenomeKeratinsOpen Reading FramesPhylogenyPolymerase Chain ReactionPolymorphism, Single NucleotideDNA PrimersKeratins

Identifiers

PMID27045687
PMCPMC4820716
OpenAlexW2320856124

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.