Evidence map›Paper›PMID 27045037›Full record

ArticleInfection and immunity2016

Genetic and Molecular Basis of Kingella kingae Encapsulation.

Kimberly F Starr, Eric A Porsch, Patrick C Seed, Joseph W St Geme

Open access · bronzeAbstract read
In one paragraph

Article in Infection and immunity, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Infective Endocarditis Due toMicroorganisms · 2024
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  4. Microorganisms · 2022
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  5. Pathogenic determinants ofFrontiers in pediatrics · 2022
    Review
  6. Article
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  9. Article
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  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 4 institutions in 1 country.

Kimberly F StarrDepartment of Pediatrics and Department of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, North Carolina, USA.
Eric A PorschDepartment of Pediatrics, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.
Patrick C SeedDepartment of Pediatrics and Department of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, North Carolina, USA.
Joseph W St GemeDepartment of Pediatrics, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA stgemeiiij@email.chop.edu.
Children's Hospital of Philadelphia · USDuke Medical Center · USDuke University Hospital · USUniversity of Pennsylvania · US

Funding

Virulence mechanisms in the emerging pathogen Kingella kingaeR01AI121015 · NIAID · CHILDREN'S HOSP OF PHILADELPHIA · PI ST. GEME, JOSEPH W. · 2016 to 2020
$2.1M
Molecular basis of virulence in the emerging pathogen Kingella kingaeR56AI103125 · NIAID · CHILDREN'S HOSP OF PHILADELPHIA · PI ST. GEME, JOSEPH W. · 2013 to 2013
$394k
NIAID NIH HHS R01 AI121015NIAID NIH HHS R56 AI103125
6 · The paper itself

Abstract

Kingella kingae is a common cause of invasive disease in young children and was recently found to produce a polysaccharide capsule containing N-acetylgalactosamine (GalNAc) and β-3-deoxy-d-manno-octulosonic acid (βKdo). Given the role of capsules as important virulence factors and effective vaccine antigens, we set out to determine the genetic determinants of K. kingae encapsulation. Using a transposon library and a screen for nonencapsulated mutants, we identified the previously identified ctrABCD (ABC transporter) operon, a lipA (kpsC)-like gene, a lipB (kpsS)-like gene, and a putative glycosyltransferase gene designated csaA (capsule synthesis type a gene A). These genes were found to be present at unlinked locations scattered throughout the genome, an atypical genetic arrangement for Gram-negative bacteria that elaborate a capsule dependent on an ABC-type transporter for surface localization. The csaA gene product contains a predicted glycosyltransferase domain with structural homology to GalNAc transferases and a predicted capsule synthesis domain with structural homology to Kdo transferases, raising the possibility that this enzyme is responsible for alternately linking GalNAc to βKdo and βKdo to GalNAc. Consistent with this conclusion, mutation of the DXD motif in the GalNAc transferase domain and of the HP motif in the Kdo transferase domain resulted in a loss of encapsulation. Examination of intracellular and surface-associated capsule in deletion mutants and complemented strains further implicated the lipA (kpsC)-like gene, the lipB (kpsS)-like gene, and the csaA gene in K. kingae capsule production. These data define the genetic requirements for encapsulation in K. kingae and demonstrate an atypical organization of capsule synthesis, assembly, and export genes.

Indexed as

Gene Expression Regulation, BacterialGenome, BacterialAcetylgalactosamineBacterial CapsulesBacterial ProteinsDNA Transposable ElementsEscherichia coliGenetic Complementation TestGlycosyltransferasesKingella kingaeMutationOperonPolysaccharides, BacterialProtein DomainsRecombinant ProteinsSugar Acids2-keto-3-deoxyoctonateAcetylgalactosamineBacterial ProteinsDNA Transposable ElementsGlycosyltransferasesLipA protein, Bacterialipase activator protein, BacteriaPolysaccharides, BacterialRecombinant ProteinsSugar Acids

Identifiers

PMID27045037
PMCPMC4907139
OpenAlexW2319697455

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.