Evidence map›Paper›PMID 27044742›Full record

ArticleThe Journal of biological chemistry2016

Proteomic Characterization of Inhibitory Synapses Using a Novel pHluorin-tagged γ-Aminobutyric Acid Receptor, Type A (GABAA), α2 Subunit Knock-in Mouse.

Yasuko Nakamura, Danielle H Morrow, Amit Modgil, Deborah Huyghe, Tarek Z Deeb, Michael J Lumb, Paul A Davies, Stephen J Moss

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Shisa7 phosphorylation regulates GABAergic transmission and neurodevelopmental behaviors.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2022
    Article
  7. Article
  8. Article
  9. Regulation of GABATrends in neurosciences · 2021
    Review
  10. Article
  11. Inhibitory synaptic transmission tuned by CaDevelopment, growth & differentiation · 2020
    Review
  12. Direct Interaction of PP2A Phosphatase with GABAThe Journal of neuroscience : the official journal of the Society for Neuroscience · 2020
    Article
  13. Article
  14. Article
  15. Shisa7 is a GABAScience (New York, N.Y.) · 2019
    Article
  16. Article
  17. Article
  18. Article
  19. Diazepam Accelerates GABAFrontiers in cellular neuroscience · 2019
    Article
  20. Targeting GABAFrontiers in molecular neuroscience · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Yasuko NakamuraFrom the Department of Neuroscience, Tufts University School of Medicine, Boston Massachusetts 02111 and.
Danielle H MorrowFrom the Department of Neuroscience, Tufts University School of Medicine, Boston Massachusetts 02111 and.
Amit ModgilFrom the Department of Neuroscience, Tufts University School of Medicine, Boston Massachusetts 02111 and.
Deborah HuygheFrom the Department of Neuroscience, Tufts University School of Medicine, Boston Massachusetts 02111 and.
Tarek Z DeebFrom the Department of Neuroscience, Tufts University School of Medicine, Boston Massachusetts 02111 and.
Michael J Lumbthe Department of Neuroscience, Physiology and Pharmacology, University College, London WC1E 6BT, United Kingdom.
Paul A DaviesFrom the Department of Neuroscience, Tufts University School of Medicine, Boston Massachusetts 02111 and.
Stephen J MossFrom the Department of Neuroscience, Tufts University School of Medicine, Boston Massachusetts 02111 and the Department of Neuroscience, Physiology and Pharmacology, University College, London WC1E 6BT, United Kingdom Stephen.Moss@Tufts.edu.
Tufts University · USUniversity College London · GB

Funding

Mechanisms that determine Glutamine synthetase activity in the brainR01NS081986 · NINDS · TUFTS UNIVERSITY BOSTON · PI MOSS, STEPHEN J · 2012 to 2022
$3.7M
Constructing inhibitory synapsesR01NS051195 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI MOSS, STEPHEN J · 2006 to 2014
$3.2M
Modulation of KCC2 activity and the postnatal development of synaptic inhibitionR01NS101888 · NINDS · TUFTS UNIVERSITY BOSTON · PI DEEB, TAREK ZIAD, MOSS, STEPHEN J · 2017 to 2021
$2.3M
Novel actions of neurosteroids on GABA (A) receptor traffickingR01MH097446 · NIMH · TUFTS UNIVERSITY BOSTON · PI DAVIES, PAUL ANDREW, MOSS, STEPHEN J · 2013 to 2017
$2.1M
Deficits in KCC2 activity and the pathophysiology of Status EpilepticusR01NS087662 · NINDS · TUFTS UNIVERSITY BOSTON · PI MOSS, STEPHEN J · 2014 to 2018
$2.0M
The role of ubiquitination in regulating GABA(A) receptor functional expressionR01NS056359 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI MOSS, STEPHEN J · 2007 to 2010
$1.4M
Deficits in KCC2 activity and the pathophysiology of Autism spectrum disordersR21MH106954 · NIMH · TUFTS UNIVERSITY BOSTON · PI MOSS, STEPHEN J · 2015 to 2016
$454k
Impaired KCC2 function underlies pharmacoresistant seizuresR21NS080064 · NINDS · TUFTS UNIVERSITY BOSTON · PI MOSS, STEPHEN J · 2013 to 2014
$452k
NIMH NIH HHS R01 MH097446NIMH NIH HHS R21 MH106954NINDS NIH HHS R01 NS051195NINDS NIH HHS R01 NS056359NINDS NIH HHS R01 NS081986NINDS NIH HHS R01 NS087662NINDS NIH HHS R01 NS101888NINDS NIH HHS R21 NS080064United States NS081735
6 · The paper itself

Abstract

The accumulation of γ-aminobutyric acid receptors (GABAARs) at the appropriate postsynaptic sites is critical for determining the efficacy of fast inhibitory neurotransmission. Although we know that the majority of synaptic GABAAR subtypes are assembled from α1-3, β, and γ2 subunits, our understanding of how neurons facilitate their targeting to and stabilization at inhibitory synapses is rudimentary. To address these issues, we have created knock-in mice in which the pH-sensitive green fluorescent protein (GFP) and the Myc epitope were introduced to the extracellular domain of the mature receptor α2 subunit (pHα2). Using immunoaffinity purification and mass spectroscopy, we identified a stable complex of 174 proteins that were associated with pHα2, including other GABAAR subunits, and previously identified receptor-associated proteins such as gephyrin and collybistin. 149 of these proteins were novel GABAAR binding partners and included G-protein-coupled receptors and ion channel subunits, proteins that regulate trafficking and degradation, regulators of protein phosphorylation, GTPases, and a number of proteins that regulate their activity. Notably, members of the postsynaptic density family of proteins that are critical components of excitatory synapses were not associated with GABAARs. Crucially, we demonstrated for a subset of these novel proteins (including cullin1, ephexin, potassium channel tetramerization domain containing protein 12, mitofusin2, metabotropic glutamate receptor 5, p21-activated kinase 7, and Ras-related protein 5A) bind directly to the intracellular domains of GABAARs, validating our proteomic analysis. Thus, our experiments illustrate the complexity of the GABAAR proteome and enhance our understanding of the mechanisms neurons use to construct inhibitory synapses.

Indexed as

AnimalsBlotting, WesternElectrophysiological PhenomenaGreen Fluorescent ProteinsHEK293 CellsHippocampusHumansHydrogen-Ion ConcentrationInhibitory Postsynaptic PotentialsMass SpectrometryMice, 129 StrainMice, Inbred C57BLMice, TransgenicNeuronsProteomeProteomicsGreen Fluorescent ProteinsPHluorinProteomeReceptors, GABA-AGABA receptorion channelmass spectrometry (MS)neurobiologysynapse

Identifiers

PMID27044742
PMCPMC4933285
OpenAlexW2418680276

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.