Evidence map›Paper›PMID 27043626›Full record

ArticleToxins2016

Mechanisms that Determine the Differential Stability of Stx⁺ and Stx(-) Lysogens.

Michael P Colon, Dolonchapa Chakraborty, Yonatan Pevzner, Gerald B Koudelka

Open access · goldAbstract read
In one paragraph

Article in Toxins, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.2field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Review
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  7. Review
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  11. Article
  12. Phage Therapy: Beyond Antibacterial Action.Frontiers in medicine · 2018
    Article
  13. Shigatoxin encoding Bacteriophage ϕ24Scientific reports · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Michael P ColonDepartment of Biological Sciences, University at Buffalo, Buffalo, NY 14260, USA. mpcolon@buffalo.edu.
Dolonchapa ChakrabortyDepartment of Biological Sciences, University at Buffalo, Buffalo, NY 14260, USA. doloncha@buffalo.edu.
Yonatan PevznerDepartment of Biological Sciences, University at Buffalo, Buffalo, NY 14260, USA. yonatanp@buffalo.edu.
Gerald B KoudelkaDepartment of Biological Sciences, University at Buffalo, Buffalo, NY 14260, USA. koudelka@buffalo.edu.
University at Buffalo, State University of New York · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phages 933W, BAA2326, 434, and λ are evolutionarily-related temperate lambdoid phages that infect Escherichia coli. Although these are highly-similar phages, BAA2326 and 933W naturally encode Shiga toxin 2 (Stx⁺), but phage 434 and λ do not (Stx(-)). Previous reports suggest that the 933W Stx⁺ prophage forms less stable lysogens in E. coli than does the Stx(-) prophages λ, P22, and 434. The higher spontaneous induction frequency of the Stx⁺ prophage may be correlated with both virulence and dispersion of the Stx2-encoding phage. Here, we examined the hypothesis that lysogen instability is a common feature of Stx⁺ prophages. We found in both the absence and presence of prophage inducers (DNA damaging agents, salts), the Stx⁺ prophages induce at higher frequencies than do Stx(-) prophages. The observed instability of Stx⁺ prophages does not appear to be the result of any differences in phage development properties between Stx⁺ and Stx(-) phages. Our results indicate that differential stability of Stx⁺ and Stx(-) prophages results from both RecA-dependent and RecA-independent effects on the intracellular concentration of the respective cI repressors.

Indexed as

Bacteriophage lambdaEscherichia coliLysogenyProphagesShiga Toxin 2Shiga Toxin 2bacteriophageinductionRecAShiga toxinvirulence

Identifiers

PMID27043626
PMCPMC4848623
OpenAlexW2333573353

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.