Evidence map›Paper›PMID 27040981›Full record

ArticlePrion2016

RepA-WH1 prionoid: Clues from bacteria on factors governing phase transitions in amyloidogenesis.

Rafael Giraldo, Cristina Fernández, María Moreno-del Álamo, Laura Molina-García, Aída Revilla-García, María Cruz Sánchez-Martínez, Juan F Giménez-Abián, Susana Moreno-Díaz de la Espina

Open access · goldAbstract read
In one paragraph

Article in Prion, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Rafael Giraldoa Department of Cellular & Molecular Biology , Centro de Investigaciones Biológicas - CSIC , Madrid , Spain.
Cristina Fernándeza Department of Cellular & Molecular Biology , Centro de Investigaciones Biológicas - CSIC , Madrid , Spain.
María Moreno-del Álamoa Department of Cellular & Molecular Biology , Centro de Investigaciones Biológicas - CSIC , Madrid , Spain.
Laura Molina-Garcíaa Department of Cellular & Molecular Biology , Centro de Investigaciones Biológicas - CSIC , Madrid , Spain.
Aída Revilla-Garcíaa Department of Cellular & Molecular Biology , Centro de Investigaciones Biológicas - CSIC , Madrid , Spain.
María Cruz Sánchez-Martíneza Department of Cellular & Molecular Biology , Centro de Investigaciones Biológicas - CSIC , Madrid , Spain.
Juan F Giménez-Abiána Department of Cellular & Molecular Biology , Centro de Investigaciones Biológicas - CSIC , Madrid , Spain.
Susana Moreno-Díaz de la Espinaa Department of Cellular & Molecular Biology , Centro de Investigaciones Biológicas - CSIC , Madrid , Spain.
Centro de Investigaciones Biológicas Margarita Salas · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In bacterial plasmids, Rep proteins initiate DNA replication by undergoing a structural transformation coupled to dimer dissociation. Amyloidogenesis of the 'winged-helix' N-terminal domain of RepA (WH1) is triggered in vitro upon binding to plasmid-specific DNA sequences, and occurs at the bacterial nucleoid in vivo. Amyloid fibers are made of distorted RepA-WH1 monomers that assemble as single or double intertwined tubular protofilaments. RepA-WH1 causes in E. coli an amyloid proteinopathy, which is transmissible from mother to daughter cells, but not infectious, and enables conformational imprinting in vitro and in vivo; i.e. RepA-WH1 is a 'prionoid'. Microfluidics allow the assessment of the intracellular dynamics of RepA-WH1: bacterial lineages maintain two types (strains-like) of RepA-WH1 amyloids, either multiple compact cytotoxic particles or a single aggregate with the appearance of a fluidized hydrogel that it is mildly detrimental to growth. The Hsp70 chaperone DnaK governs the phase transition between both types of RepA-WH1 aggregates in vivo, thus modulating the vertical propagation of the prionoid. Engineering chimeras between the Sup35p/[PSI(+)] prion and RepA-WH1 generates [REP-PSI(+)], a synthetic prion exhibiting strong and weak phenotypic variants in yeast. These recent findings on a synthetic, self-contained bacterial prionoid illuminate central issues of protein amyloidogenesis.

Indexed as

Protein DomainsAmyloidDNA, BacterialDNA HelicasesHSP70 Heat-Shock ProteinsPrionsProtein ConformationTrans-ActivatorsAmyloidDNA, BacterialDNA HelicasesHSP70 Heat-Shock ProteinsPrionsreplication initiator proteinTrans-Activatorsamyloid polymorphismamyloid proteinopathybacterial prionoidHsp70 chaperonephase transitionsRepA-WH1

Identifiers

PMID27040981
PMCPMC4981189
OpenAlexW2409398079

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.